RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 WDR25Q64LD2 544 aaPredicted RBP3.04□□□□□ -1.92
PCM1-220ENST00000523896 EMBQ6PCB8 327 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 C1orf186Q6ZWK4 172 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 BATF2Q8N1L9 274 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 SAMD12Q8N8I0 201 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 COLGALT1Q8NBJ5 622 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 TMEM185AQ8NFB2 350 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 BEST4Q8NFU0 473 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 FBXO25Q8TCJ0 367 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 CCDC47Q96A33 483 aaKnown RBP3.04□□□□□ -1.92
PCM1-220ENST00000523896 C16orf58Q96GQ5 468 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 COG3Q96JB2 828 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 RUFY1Q96T51 708 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 RBM24Q9BX46 236 aaKnown RBP3.04□□□□□ -1.92
PCM1-220ENST00000523896 RAB11FIP5Q9BXF6 653 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 LRRCC1Q9C099 1032 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 DDX47Q9H0S4 455 aaKnown RBP3.04□□□□□ -1.92
PCM1-220ENST00000523896 ABCG4Q9H172 646 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 ADNPQ9H2P0 1102 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 ERVK-18Q9QC07 812 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 ZNF346Q9UL40 294 aaKnown RBP3.04□□□□□ -1.92
PCM1-220ENST00000523896 CPQQ9Y646 472 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 SUPT6HQ7KZ85 1726 aaKnown RBP3.04□□□□□ -1.92
PCM1-220ENST00000523896 NHSL1Q5SYE7 1610 aa3.04□□□□□ -1.92
PCM1-220ENST00000523896 MAGI3Q5TCQ9 1506 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 ARAP3Q8WWN8 1544 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 NPC1L1Q9UHC9 1359 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 RNF212BA8MTL3 300 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 SH2D1BO14796 132 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 HIST1H2AGP0C0S8 130 aaPredicted RBP3.03□□□□□ -1.92
PCM1-220ENST00000523896 ATP6V1E1P36543 226 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 CCL11P51671 97 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 STARD6P59095 220 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 EMC2Q15006 297 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 PCK2Q16822 640 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 VWA2Q5GFL6 755 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 LIPJQ5W064 366 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 STEAP1BQ6NZ63 245 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 ASRGL1Q7L266 308 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 TIPARPQ7Z3E1 657 aaKnown RBP3.03□□□□□ -1.92
PCM1-220ENST00000523896 ADAMTSL2Q86TH1 951 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 SLC25A42Q86VD7 318 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.03□□□□□ -1.92
PCM1-220ENST00000523896 LRRC49Q8IUZ0 686 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 CCDC71Q8IV32 467 aaPredicted RBP3.03□□□□□ -1.92
PCM1-220ENST00000523896 RELL2Q8NC24 303 aaPredicted RBP3.03□□□□□ -1.92
PCM1-220ENST00000523896 LEMD2Q8NC56 503 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 OR52E1Q8NGJ3 308 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 FLVCR1-AS1Q8TAF5 88 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 KIAA1524Q8TCG1 905 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 SLC13A3Q8WWT9 602 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 HIST1H2ACQ93077 130 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 C19orf43Q9BQ61 176 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 SPXQ9BT56 116 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 ABCG8Q9H221 673 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 Q9HAA7 133 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 SYTL2Q9HCH5 934 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 COPS7AQ9UBW8 275 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 KCNN3Q9UGI6 736 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 TUBGCP4Q9UGJ1 667 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 FETUBQ9UGM5 382 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 FAM153AQ9UHL3 310 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 DNPEPQ9ULA0 475 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 ENTPD4Q9Y227 616 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 SLC6A5Q9Y345 797 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 MRPL11Q9Y3B7 192 aaKnown RBP3.03□□□□□ -1.92
PCM1-220ENST00000523896 STRAPQ9Y3F4 350 aaKnown RBP3.03□□□□□ -1.92
PCM1-220ENST00000523896 FBXO7Q9Y3I1 522 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 CSAG2Q9Y5P2 127 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 STYXL1Q9Y6J8 313 aa3.03□□□□□ -1.92
PCM1-220ENST00000523896 WDR7Q9Y4E6 1490 aa3.03□□□□□ -1.93
PCM1-220ENST00000523896 PTPRGP23470 1445 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 KIF7Q2M1P5 1343 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 FAM205AQ6ZU69 1335 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 ALKQ9UM73 1620 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 A0A1B0GTH9 108 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 TEX48A0A1B0GUV7 120 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 A0A1B0GVY2 172 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 RPL37AP8A6NKH3 93 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 FOXI3A8MTJ6 420 aaPredicted RBP3.02□□□□□ -1.93
PCM1-220ENST00000523896 HTATSF1O43719 755 aaKnown RBP3.02□□□□□ -1.93
PCM1-220ENST00000523896 GALR3O60755 368 aaPredicted RBP3.02□□□□□ -1.93
PCM1-220ENST00000523896 SYNGR4O95473 234 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 RENP00797 406 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 MT-ND1P03886 318 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 PGK2P07205 417 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 ACADSP16219 412 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 CAPN2P17655 700 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 ZNF131P52739 623 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 NLRP11P59045 1033 aaKnown RBP3.02□□□□□ -1.93
PCM1-220ENST00000523896 RPS4XP62701 263 aaKnown RBP3.02□□□□□ -1.93
PCM1-220ENST00000523896 SHROOM1Q2M3G4 852 aaPredicted RBP3.02□□□□□ -1.93
PCM1-220ENST00000523896 UNC50Q53HI1 259 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 TCTEX1D4Q5JR98 221 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 ZNF506Q5JVG8 444 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 REP15Q6BDI9 236 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 RAB12Q6IQ22 244 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 ARMCX5Q6P1M9 558 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 TATDN1Q6P1N9 297 aa3.02□□□□□ -1.93
PCM1-220ENST00000523896 BNIPLQ7Z465 357 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms