RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 CENPUQ71F23 418 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 PIWIL4Q7Z3Z4 852 aaKnown RBP7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 LINC00523Q86TU6 105 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 ZNF595Q8IYB9 648 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 C3orf56Q8N813 242 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 SEMA6DQ8NFY4 1073 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 SPPL2AQ8TCT8 520 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 FBLIM1Q8WUP2 373 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 DIO2Q92813 273 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 UCN3Q969E3 161 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 C11orf24Q96F05 449 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 SNF8Q96H20 258 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 TRAF4Q9BUZ4 470 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 C12orf65Q9H3J6 166 aaKnown RBP7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 MANSC1Q9H8J5 431 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 CAPN11Q9UMQ6 739 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 B3GALT5Q9Y2C3 310 aa7.97□□□□□ -1.13
TRAPPC9-212ENST00000521944 MACROD2A1Z1Q3 448 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 TMEM89A2RUT3 159 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 TMPRSS2O15393 492 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 SNX4O95219 450 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 CLPSP04118 112 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 MPC1LP0DKB6 136 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 CD8BP10966 210 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 PAMP19021 973 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 PTNP21246 168 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 CHMP24386 653 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 SERPINB3P29508 390 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 RPL22P35268 128 aaKnown RBP7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 CASP3P42574 277 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 KCNJ5P48544 419 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 LIM2P55344 173 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 CLDN15P56746 228 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 SIRPAP78324 504 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 IRX1P78414 480 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 ZNF844Q08AG5 666 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 TOMM20Q15388 145 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 CPSF6Q16630 551 aaKnown RBP eCLIP7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 PHKG1Q16816 387 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 CES3Q6UWW8 571 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 GRAMD2AQ8IUY3 354 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 HTRA1Q92743 480 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 NEIL2Q969S2 332 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 FBXW5Q969U6 566 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 LRRC45Q96CN5 670 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 MS4A6EQ96DS6 147 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 HS6ST2Q96MM7 605 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 RUNDC3BQ96NL0 473 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 NPLQ9BXD5 320 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 ZNF696Q9H7X3 374 aa7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 TEX10Q9NXF1 929 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC9-212ENST00000521944 LRIT2A6NDA9 550 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 H3BMM5 538 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 PSMD3O43242 534 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 EMC8O43402 210 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 VAPBO95292 243 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 GYPCP04921 128 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 ZNF708P17019 499 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 TNNI3P19429 210 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 RAB6AP20340 208 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 REEP5Q00765 189 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 TIAL1Q01085 375 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 CTBP1Q13363 440 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 IQCB1Q15051 598 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 ZNF672Q499Z4 452 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 CCDC181Q5TID7 509 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 FAM166AQ6J272 317 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 UGT3A1Q6NUS8 523 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 CDPF1Q6NVV7 123 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 DTX2Q86UW9 622 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 RHOT2Q8IXI1 618 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 DND1Q8IYX4 353 aaKnown RBP7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 PLD6Q8N2A8 252 aaKnown RBP7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 ZNF525Q8N782 197 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 OR56A3Q8NH54 315 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 FIG4Q92562 907 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 PPWD1Q96BP3 646 aaKnown RBP7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 REPS1Q96D71 796 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 MFSD3Q96ES6 412 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 TMEM41AQ96HV5 264 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 ZNF845Q96IR2 970 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 KRT12Q99456 494 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 SOX7Q9BT81 388 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 NTMT1Q9BV86 223 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 OSBPL8Q9BZF1 889 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 BARX1Q9HBU1 254 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 KLHL42Q9P2K6 505 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 KCNS2Q9ULS6 477 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 DAPP1Q9UN19 280 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 EFR3BQ9Y2G0 817 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 DLGAP4Q9Y2H0 992 aa7.95□□□□□ -1.14
TRAPPC9-212ENST00000521944 URADA6NGE7 173 aa7.94□□□□□ -1.14
TRAPPC9-212ENST00000521944 B4DXG7 233 aa7.94□□□□□ -1.14
TRAPPC9-212ENST00000521944 H0YC42 278 aa7.94□□□□□ -1.14
TRAPPC9-212ENST00000521944 FBXO24O75426 580 aa7.94□□□□□ -1.14
TRAPPC9-212ENST00000521944 FTCDO95954 541 aa7.94□□□□□ -1.14
TRAPPC9-212ENST00000521944 CERS1P27544 350 aa7.94□□□□□ -1.14
TRAPPC9-212ENST00000521944 PTGDSP41222 190 aa7.94□□□□□ -1.14
TRAPPC9-212ENST00000521944 MSH2P43246 934 aa7.94□□□□□ -1.14
TRAPPC9-212ENST00000521944 MASP1P48740 699 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms