RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 IQCF2Q8IXL9 164 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 SLC22A8Q8TCC7 542 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 ALPK1Q96QP1 1244 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 UGDHO60701 494 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 TMEM236Q5W0B7 351 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 TANGO2Q6ICL3 276 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 PDZD3Q86UT5 571 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 KLHDC8AQ8IYD2 350 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 MINDY1Q8N5J2 469 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 DENND6BQ8NEG7 585 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 RHBDD1Q8TEB9 315 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 BRD7Q9NPI1 651 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 TIGARQ9NQ88 270 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 EBF1Q9UH73 591 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 PCDHGB5Q9Y5G0 923 aa15.44■□□□□ 0.06
USP42-207ENST00000521713 NUAK1O60285 661 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 IFNA21P01568 189 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 BMP2P12643 396 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 IL4RP24394 825 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 ELK4P28324 431 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 SLC6A6P31641 620 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 CDK3Q00526 305 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 TDHQ8IZJ6 230 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 NAT6Q93015 286 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 HS3ST2Q9Y278 367 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 SNAP29O95721 258 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 CHRM5P08912 532 aaPredicted RBP15.43■□□□□ 0.06
USP42-207ENST00000521713 ARHGAP19Q14CB8 494 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 RELTQ969Z4 430 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 L3HYPDHQ96EM0 354 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 COPZ2Q9P299 210 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 DNASE1P24855 282 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 CD38P28907 300 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 HTR2BP41595 481 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 CEBPGP53567 150 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 CLDN8P56748 225 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 VLDLRP98155 873 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 ABRAXAS2Q15018 415 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 SEC23BQ15437 767 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 GRHL2Q6ISB3 625 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 METTL25Q8N6Q8 603 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 CWH43Q9H720 699 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 SLC39A1Q9NY26 324 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 TAS2R10Q9NYW0 307 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 A6NCN8 305 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 CSTAP01040 98 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 OR3A3P47888 321 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 OR3A2P47893 321 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 PXNP49023 591 aaPredicted RBP15.43■□□□□ 0.06
USP42-207ENST00000521713 NUDT6P53370 316 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 CDHR3Q6ZTQ4 885 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 ZNF676Q8N7Q3 588 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 RASGEF1AQ8N9B8 481 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 ZNF486Q96H40 463 aaPredicted RBP15.43■□□□□ 0.06
USP42-207ENST00000521713 HSPA12BQ96MM6 686 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 CMKLR1Q99788 373 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 CENPMQ9NSP4 180 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 ANKMY1Q9P2S6 941 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 NOX1Q9Y5S8 564 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 SCN7AQ01118 1682 aa15.43■□□□□ 0.06
USP42-207ENST00000521713 ANKRD36CQ5JPF3 1778 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 A0A1B0GVC2 190 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 H3BNC9 293 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 CRYZL1O95825 349 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 MAPK3P27361 379 aaPredicted RBP15.42■□□□□ 0.06
USP42-207ENST00000521713 GAREM2Q75VX8 874 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 GPR149Q86SP6 731 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 SH3YL1Q96HL8 342 aaPredicted RBP15.42■□□□□ 0.06
USP42-207ENST00000521713 TIMM29Q9BSF4 260 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 PCTPQ9UKL6 214 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 FEZF1A0PJY2 475 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 M0R036 132 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 HCRTR2O43614 444 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 SHHQ15465 462 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 ZNF765Q7L2R6 523 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 MFSD2AQ8NA29 543 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 CD200R1Q8TD46 325 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 MAELQ96JY0 434 aaKnown RBP15.42■□□□□ 0.06
USP42-207ENST00000521713 BARD1Q99728 777 aaKnown RBP15.42■□□□□ 0.06
USP42-207ENST00000521713 FUNDC2Q9BWH2 189 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 MAGIXQ9H6Y5 334 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 SEC61A2Q9H9S3 476 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 TBX21Q9UL17 535 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 SYNGR4O95473 234 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 SOX9P48436 509 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 CDKL1Q00532 357 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 NANOGP8Q6NSW7 305 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 RTN4RL1Q86UN2 441 aaPredicted RBP15.42■□□□□ 0.06
USP42-207ENST00000521713 OR2L3Q8NG85 312 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 OR6C4Q8NGE1 309 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 OR52B6Q8NGF0 335 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 S100A16Q96FQ6 103 aaKnown RBP15.42■□□□□ 0.06
USP42-207ENST00000521713 ZNF350Q9GZX5 532 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 NANOGQ9H9S0 305 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 TAS2R3Q9NYW6 316 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 E7EQ34 232 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 HNRNPA0Q13151 305 aaKnown RBP15.42■□□□□ 0.06
USP42-207ENST00000521713 DUS1LQ6P1R4 473 aaKnown RBP15.42■□□□□ 0.06
USP42-207ENST00000521713 SLC15A4Q8N697 577 aa15.42■□□□□ 0.06
USP42-207ENST00000521713 TMEM203Q969S6 136 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms