RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 TEX264Q9Y6I9 313 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 CXCL14O95715 111 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 PDGFBP01127 241 aaPredicted RBP3.98□□□□□ -1.77
SKP1-208ENST00000521216 PIGRP01833 764 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 PTMAP06454 111 aaKnown RBP3.98□□□□□ -1.77
SKP1-208ENST00000521216 FCARP24071 287 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 TNFRSF4P43489 277 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 NDST1P52848 882 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 NLRP11P59045 1033 aaKnown RBP3.98□□□□□ -1.77
SKP1-208ENST00000521216 SRP54P61011 504 aaKnown RBP3.98□□□□□ -1.77
SKP1-208ENST00000521216 CLPPQ16740 277 aaPredicted RBP3.98□□□□□ -1.77
SKP1-208ENST00000521216 HKDC1Q2TB90 917 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 C14orf28Q4W4Y0 310 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 SLC22A18ASQ8N1D0 253 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 LEMD2Q8NC56 503 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 TBCKQ8TEA7 893 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 SLCO4A1Q96BD0 722 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 CAPNS2Q96L46 248 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 MCCC1Q96RQ3 725 aaPredicted RBP3.98□□□□□ -1.77
SKP1-208ENST00000521216 RSPH9Q9H1X1 276 aaPredicted RBP3.98□□□□□ -1.77
SKP1-208ENST00000521216 SLC7A10Q9NS82 523 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 CLEC5AQ9NY25 188 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 TUBGCP4Q9UGJ1 667 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 TRMT6Q9UJA5 497 aaKnown RBP3.98□□□□□ -1.77
SKP1-208ENST00000521216 NAP1L2Q9ULW6 460 aaPredicted RBP3.98□□□□□ -1.77
SKP1-208ENST00000521216 RNF24Q9Y225 148 aa3.98□□□□□ -1.77
SKP1-208ENST00000521216 STRAPQ9Y3F4 350 aaKnown RBP3.98□□□□□ -1.77
SKP1-208ENST00000521216 TRABD2BA6NFA1 517 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 CFLARO15519 480 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 SRPX2O60687 465 aaPredicted RBP3.97□□□□□ -1.77
SKP1-208ENST00000521216 ZNF253O75346 499 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 SRSF10O75494 262 aaKnown RBP3.97□□□□□ -1.77
SKP1-208ENST00000521216 KBTBD11O94819 623 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 SYNGR4O95473 234 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 OLFM2O95897 454 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 UCP1P25874 307 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 MFAP2P55001 183 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 RAG2P55895 527 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 KRTAP10-5P60370 271 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 KRT71Q3SY84 523 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 ACER2Q5QJU3 275 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 FAM219BQ5XKK7 198 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 RHBDD2Q6NTF9 364 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 GPR142Q7Z601 462 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 MARCH9Q86YJ5 346 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 ARL14Q8N4G2 192 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 CCNYQ8ND76 341 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 BIRC7Q96CA5 298 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 NTNG2Q96CW9 530 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 DEFB118Q96PH6 123 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 CARD9Q9H257 536 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 TNMDQ9H2S6 317 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 THAP9Q9H5L6 903 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 NRN1Q9NPD7 142 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 HPS4Q9NQG7 708 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 PRMT8Q9NR22 394 aaPredicted RBP3.97□□□□□ -1.77
SKP1-208ENST00000521216 FETUBQ9UGM5 382 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 ZNF107Q9UII5 783 aaPredicted RBP3.97□□□□□ -1.77
SKP1-208ENST00000521216 ATG4BQ9Y4P1 393 aa3.97□□□□□ -1.77
SKP1-208ENST00000521216 DHX29Q7Z478 1369 aaKnown RBP3.97□□□□□ -1.77
SKP1-208ENST00000521216 CCDC180Q9P1Z9 1646 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 EI24O14681 340 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 PHOX2AO14813 284 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 NME2P1O60361 137 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 RHBDL1O75783 438 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 NUDT14O95848 222 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 GOT2P00505 430 aaKnown RBP3.96□□□□□ -1.78
SKP1-208ENST00000521216 OAS1P00973 400 aaKnown RBP3.96□□□□□ -1.78
SKP1-208ENST00000521216 APRTP07741 180 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 GSTA1P08263 222 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 HAGHQ16775 308 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 C17orf58Q2M2W7 97 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 CWC27Q6UX04 472 aaKnown RBP3.96□□□□□ -1.78
SKP1-208ENST00000521216 MOB2Q70IA6 237 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 ADCK1Q86TW2 530 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 ABCA7Q8IZY2 2146 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 PYROXD2Q8N2H3 581 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 LINC00612Q8N6U2 182 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 TMEM185AQ8NFB2 350 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 ZPLD1Q8TCW7 415 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 URGCPQ8TCY9 931 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 ZBED6CLQ96FA7 236 aaPredicted RBP3.96□□□□□ -1.78
SKP1-208ENST00000521216 ST6GALNAC5Q9BVH7 336 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 ABCD2Q9UBJ2 740 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 APPL1Q9UKG1 709 aa3.96□□□□□ -1.78
SKP1-208ENST00000521216 RPGRIP1LQ68CZ1 1315 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 TP53BP1Q12888 1972 aaPredicted RBP3.95□□□□□ -1.78
SKP1-208ENST00000521216 IGLV3-10A0A075B6K4 115 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 TRBV2A0A0J9YWF9 115 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 CYB561D2O14569 222 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 THY1P04216 161 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 GNSP15586 552 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 ATP6V1E1P36543 226 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 ARHGDIAP52565 204 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 RUNX3Q13761 415 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 SHROOM1Q2M3G4 852 aaPredicted RBP3.95□□□□□ -1.78
SKP1-208ENST00000521216 ATAD3CQ5T2N8 411 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 RNLSQ5VYX0 342 aa3.95□□□□□ -1.78
SKP1-208ENST00000521216 DLEU7Q6UYE1 221 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms