RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 LIX1Q8N485 282 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 ZNF441Q8N8Z8 693 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 OR7G1Q8NGA0 311 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 TRPC4APQ8TEL6 797 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 ZNF597Q96LX8 424 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 TTYH2Q9BSA4 534 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 C1QTNF3Q9BXJ4 246 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 OR10A5Q9H207 317 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 BRF2Q9HAW0 419 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 PROK2Q9HC23 129 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 SPRR3Q9UBC9 169 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 TRPS1Q9UHF7 1281 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 PCDHA9Q9Y5H5 950 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 PDZD2O15018 2839 aa14.55□□□□□ -0.08
CLN8-205ENST00000520991 PHF3Q92576 2039 aaKnown RBP14.54□□□□□ -0.08
CLN8-205ENST00000520991 KIF2AO00139 706 aaPredicted RBP14.54□□□□□ -0.08
CLN8-205ENST00000520991 ERAL1O75616 437 aaKnown RBP14.54□□□□□ -0.08
CLN8-205ENST00000520991 SUPT7LO94864 414 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 OR4F21O95013 312 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 SBK3P0C264 359 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 GLI4P10075 376 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 KRT15P19012 456 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 GDF1P27539 372 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 TRPC1P48995 793 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 RPP38P78345 283 aaKnown RBP14.54□□□□□ -0.08
CLN8-205ENST00000520991 CLCQ05315 142 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 GALNT1Q10472 559 aaPredicted RBP14.54□□□□□ -0.08
CLN8-205ENST00000520991 C1orf185Q5T7R7 199 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 TMEM198Q66K66 360 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 SLC48A1Q6P1K1 146 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 IFT20Q8IY31 132 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 VWA5B2Q8N398 1253 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 ZNF615Q8N8J6 731 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 CDYL2Q8N8U2 506 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 ACBD4Q8NC06 268 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 HBEGFQ99075 208 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 FAIM2Q9BWQ8 316 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 BRINP2Q9C0B6 783 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 SLC6A15Q9H2J7 730 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 QPCTLQ9NXS2 382 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 PSME2Q9UL46 239 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 FAM215AQ9Y5M1 114 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 NPFFR2Q9Y5X5 522 aa14.54□□□□□ -0.08
CLN8-205ENST00000520991 ANKRD33BA6NCL7 494 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 FOXO6A8MYZ6 492 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 TOXO94900 526 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 KRT6AP02538 564 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 KRT6BP04259 564 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 GABRA1P14867 456 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 ENDOUP21128 410 aaKnown RBP14.53□□□□□ -0.08
CLN8-205ENST00000520991 HSD17B3P37058 310 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 FEN1P39748 380 aaKnown RBP14.53□□□□□ -0.08
CLN8-205ENST00000520991 ZFP36L2P47974 494 aaKnown RBP14.53□□□□□ -0.08
CLN8-205ENST00000520991 KRT6CP48668 564 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 MASP1P48740 699 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 ALDH9A1P49189 494 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 TFF3Q07654 80 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 RASA2Q15283 850 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 RTL6Q6ICC9 239 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 TIFABQ6ZNK6 161 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 TRMT10CQ7L0Y3 403 aaKnown RBP14.53□□□□□ -0.08
CLN8-205ENST00000520991 PRR22Q8IZ63 422 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 MMP21Q8N119 569 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 TMEM151AQ8N4L1 468 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 C1orf52Q8N6N3 182 aaKnown RBP14.53□□□□□ -0.08
CLN8-205ENST00000520991 CEP112Q8N8E3 955 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 C17orf47Q8NEP4 570 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 KIF18AQ8NI77 898 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 ADIPOR1Q96A54 375 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 KLHL29Q96CT2 875 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 RILPQ96NA2 401 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 TREX2Q9BQ50 279 aaPredicted RBP14.53□□□□□ -0.08
CLN8-205ENST00000520991 ACKR4Q9NPB9 350 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 NPDC1Q9NQX5 325 aaPredicted RBP14.53□□□□□ -0.08
CLN8-205ENST00000520991 TMEM216Q9P0N5 145 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 BCAP29Q9UHQ4 241 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 CES1P1Q9UKY3 287 aa14.53□□□□□ -0.08
CLN8-205ENST00000520991 C15orf38-AP3S2A0A0A6YYH1 394 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 A0A0G2JNJ9 132 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 FAM47E-STBD1D6RA91 191 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 MANBAO00462 879 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 RIPK2O43353 540 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 TRIM3O75382 744 aaPredicted RBP14.52□□□□□ -0.08
CLN8-205ENST00000520991 TRAPPC6AO75865 159 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 SNX4O95219 450 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 ESRRBO95718 433 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 ATP1B1P05026 303 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 HOXD4P09016 255 aaPredicted RBP14.52□□□□□ -0.08
CLN8-205ENST00000520991 HSD3B1P14060 373 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 IGFBP2P18065 325 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 CSNK2A2P19784 350 aaPredicted RBP14.52□□□□□ -0.08
CLN8-205ENST00000520991 HSD3B2P26439 372 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 MSX1P28360 303 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 GCAP28676 217 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 TCHHL1Q5QJ38 904 aaPredicted RBP14.52□□□□□ -0.08
CLN8-205ENST00000520991 ZNF678Q5SXM1 525 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 BICRALQ6AI39 1079 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 PACS2Q86VP3 889 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 LCA5Q86VQ0 697 aa14.52□□□□□ -0.08
CLN8-205ENST00000520991 NEIL3Q8TAT5 605 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms