RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 RNF165Q6ZSG1 346 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 GHDCQ8N2G8 530 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 DBF4BQ8NFT6 615 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 OR52P1PQ8NH57 321 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 CCDC120Q96HB5 630 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 RTP3Q9BQQ7 232 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 SRRQ9GZT4 340 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 TMEM38AQ9H6F2 299 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 STON1Q9Y6Q2 735 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 H0YIV9 168 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 CSO75390 466 aaKnown RBP8.09□□□□□ -1.11
PCM1-212ENST00000519253 PEX11BO96011 259 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 ACTC1P68032 377 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 ACTA1P68133 377 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 CRTC1Q6UUV9 634 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 RFPL4BQ6ZWI9 263 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 MSRB3Q8IXL7 192 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 SLC44A3Q8N4M1 653 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 S100A16Q96FQ6 103 aaKnown RBP8.09□□□□□ -1.11
PCM1-212ENST00000519253 TM9SF2Q99805 663 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 LIPT1Q9Y234 373 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 TMEM5Q9Y2B1 443 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 A0A0G2JPF8 293 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 HNRNPCL3B7ZW38 293 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 TSPAN6O43657 245 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 SCN2BO60939 215 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 HNRNPCL4P0DMR1 293 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 OR12D1P0DN82 309 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 CCR7P32248 378 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 KCNJ10P78508 379 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 CAMK1Q14012 370 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 FNDC3BQ53EP0 1204 aaKnown RBP8.09□□□□□ -1.11
PCM1-212ENST00000519253 FRRS1Q6ZNA5 592 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 TSPAN33Q86UF1 283 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 TRAM1L1Q8N609 369 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 SETD7Q8WTS6 366 aaKnown RBP8.09□□□□□ -1.11
PCM1-212ENST00000519253 ZNF354BQ96LW1 612 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 MCHR1Q99705 422 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 ALOXE3Q9BYJ1 711 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 KANTRA0A1W2PQU2 76 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 SLC22A31A6NKX4 558 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 TMEM189-UBE2V1I3L0A0 370 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 FABP7O15540 132 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 EPCAMP16422 314 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 RPS26P62854 115 aaKnown RBP8.09□□□□□ -1.11
PCM1-212ENST00000519253 HBA1P69905 142 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 GPR50Q13585 617 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 LASP1Q14847 261 aaKnown RBP8.09□□□□□ -1.11
PCM1-212ENST00000519253 OCLNQ16625 522 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 SLC5A12Q1EHB4 618 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 ZNF791Q3KP31 576 aaPredicted RBP8.09□□□□□ -1.11
PCM1-212ENST00000519253 SLC25A25Q6KCM7 469 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 IDO2Q6ZQW0 420 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 PDZD9Q8IXQ8 264 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 NANOGP1Q8N7R0 232 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 TMEM163Q8TC26 289 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 FERD3LQ96RJ6 166 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 BTAF1O14981 1849 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 NAP1L6A6NFF2 107 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 TRIM64BA6NI03 449 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 C1QTNF3-AMACRE9PGA6 284 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 CREBL2O60519 120 aaPredicted RBP8.09□□□□□ -1.11
PCM1-212ENST00000519253 KLHL18O94889 574 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 SELPP16109 830 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 NDUFV2P19404 249 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 GCGRP47871 477 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 SPINT3P49223 89 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 TBPL1P62380 186 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 PUDPQ08623 228 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 PIN1Q13526 163 aaPredicted RBP8.09□□□□□ -1.11
PCM1-212ENST00000519253 SPRYD7Q5W111 196 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 SERPINA13PQ6UXR4 307 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 TMCO2Q7Z6W1 182 aaPredicted RBP8.09□□□□□ -1.11
PCM1-212ENST00000519253 OR8D1Q8WZ84 308 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 SCAMP4Q969E2 229 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 TMEM175Q9BSA9 504 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 YIPF4Q9BSR8 244 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 EMC7Q9NPA0 242 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 NDUFB11Q9NX14 153 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 SCP2D1Q9UJQ7 156 aa8.09□□□□□ -1.11
PCM1-212ENST00000519253 ANXA2P2A6NMY6 339 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 SLC16A8O95907 504 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 EPHX1P07099 455 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 ANXA2P07355 339 aaKnown RBP8.08□□□□□ -1.12
PCM1-212ENST00000519253 ALPPL2P10696 532 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 CCL14Q16627 93 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 PRSS36Q5K4E3 855 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 RPL13AP3Q6NVV1 102 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 TMEM17Q86X19 198 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 ZNF419Q96HQ0 510 aaPredicted RBP8.08□□□□□ -1.12
PCM1-212ENST00000519253 WDFY2Q96P53 400 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.08□□□□□ -1.124e-7■□□□□ 11.1
PCM1-212ENST00000519253 MGAT4CQ9UBM8 478 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 FBXW2Q9UKT8 454 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 POLHQ9Y253 713 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 LOC105369274A0A096LPK9 316 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 A0A0U1RQS6 177 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 K7ERQ8 282 aa8.08□□□□□ -1.12
PCM1-212ENST00000519253 ITGBL1O95965 494 aaPredicted RBP8.08□□□□□ -1.12
PCM1-212ENST00000519253 TMEM115Q12893 351 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms