RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 IGHV2-70P01814 119 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 EIF4EP06730 217 aaKnown RBP12.86□□□□□ -0.35
PABPC1-208ENST00000519004 ACPPP15309 386 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 NFYAP23511 347 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-208ENST00000519004 ACADLP28330 430 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 KIR3DL1P43629 444 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 CDKN1CP49918 316 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-208ENST00000519004 WNT3P56703 355 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 C12orf73Q69YU5 71 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 Q6ZTK2 550 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 ARIH2OSQ8N7S6 290 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 GPR26Q8NDV2 337 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 TTC16Q8NEE8 873 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 GLYATL2Q8WU03 294 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 GATAD2BQ8WXI9 593 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 OR4K3Q96R72 315 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 NSUN3Q9H649 340 aaKnown RBP12.86□□□□□ -0.35
PABPC1-208ENST00000519004 NIT2Q9NQR4 276 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 THSD1Q9NS62 852 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 SPHK1Q9NYA1 384 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 TESQ9UGI8 421 aaKnown RBP12.86□□□□□ -0.35
PABPC1-208ENST00000519004 RALGAPA2Q2PPJ7 1873 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 PHIPQ8WWQ0 1821 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 LOC285556D6RIA3 1793 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 GJB3O75712 270 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 CXCL14O95715 111 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 ZNF806P0C7X5 589 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 PRPS2P11908 318 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 PKMP14618 531 aaKnown RBP12.86□□□□□ -0.35
PABPC1-208ENST00000519004 MST1P26927 711 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 PCGF2P35227 344 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 RFX3P48380 749 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 HMGA2P52926 109 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 CTSCP53634 463 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 SIM1P81133 766 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-208ENST00000519004 ZSWIM7Q19AV6 140 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 FBXO47Q5MNV8 452 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 HES5Q5TA89 166 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 ZNF770Q6IQ21 691 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-208ENST00000519004 SBSNQ6UWP8 590 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 RBMS3Q6XE24 437 aaKnown RBP12.86□□□□□ -0.35
PABPC1-208ENST00000519004 MARCH9Q86YJ5 346 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 SIAH3Q8IW03 269 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 SULF1Q8IWU6 871 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 CLECL1Q8IZS7 167 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 BPIFCQ8NFQ6 507 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 OR5M9Q8NGP3 310 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 ARRDC2Q8TBH0 407 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 ELP4Q96EB1 424 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 LCORQ96JN0 433 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-208ENST00000519004 ABHD1Q96SE0 405 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 CRB3Q9BUF7 120 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 FZD4Q9ULV1 537 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 AP1M2Q9Y6Q5 423 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 TTLL8A6PVC2 850 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 SCAMP1O15126 338 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 FGF10O15520 208 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-208ENST00000519004 SOX14O95416 240 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 CPSF4O95639 269 aaKnown RBP12.85□□□□□ -0.35
PABPC1-208ENST00000519004 EGFP01133 1207 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 ALPIP09923 528 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 PVALBP20472 110 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-208ENST00000519004 S100A11P31949 105 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 RORAP35398 523 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 CHI3L1P36222 383 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-208ENST00000519004 GDF5P43026 501 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 GK2Q14410 553 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-208ENST00000519004 INSL4Q14641 139 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 OCLNQ16625 522 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 HACD4Q5VWC8 232 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 HAGHLQ6PII5 290 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-208ENST00000519004 LRRC28Q86X40 367 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-208ENST00000519004 TCEANCQ8N8B7 351 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 L3MBTL4Q8NA19 623 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 HUS1BQ8NHY5 278 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 NEIL3Q8TAT5 605 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 COPS8Q99627 209 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 TMPRSS13Q9BYE2 586 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 TPT1P8Q9HAU6 139 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 SLC6A20Q9NP91 592 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 ISYNA1Q9NPH2 558 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 RPS6KB2Q9UBS0 482 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 MIOXQ9UGB7 285 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 ZNF214Q9UL59 606 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-208ENST00000519004 CA5BQ9Y2D0 317 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 ZSWIM8A7E2V4 1837 aa12.85□□□□□ -0.35
PABPC1-208ENST00000519004 FFAR2O15552 330 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 GALR3O60755 368 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-208ENST00000519004 GAAP10253 952 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 NR2F6P10588 404 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 RBMS1P29558 406 aaKnown RBP12.84□□□□□ -0.35
PABPC1-208ENST00000519004 XCR1P46094 333 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 PITPNBP48739 271 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 GAS1P54826 345 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 GANABQ14697 944 aaKnown RBP12.84□□□□□ -0.35
PABPC1-208ENST00000519004 IL20RBQ6UXL0 311 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 FAM196AQ6ZSG2 479 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 NR2C2APQ86WQ0 139 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 LDLRAD3Q86YD5 345 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 CMIPQ8IY22 773 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms