RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 BLOC1S5Q8TDH9 187 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 DVL3Q92997 716 aaPredicted RBP2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 SCAMP4Q969E2 229 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 PTCD3Q96EY7 689 aaKnown RBP2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 CDKN2AIPNLQ96HQ2 116 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 TTC25Q96NG3 672 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 FOXN4Q96NZ1 517 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 TSC22D3Q99576 134 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 COPS8Q99627 209 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 FAM118BQ9BPY3 351 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 SLC30A2Q9BRI3 323 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 TIMM29Q9BSF4 260 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 CCM2Q9BSQ5 444 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 CRB3Q9BUF7 120 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 FICDQ9BVA6 458 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 RIOK2Q9BVS4 552 aaKnown RBP2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 SPATA16Q9BXB7 569 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 CEP41Q9BYV8 373 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 ROPN1BQ9BZX4 212 aaPredicted RBP2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 TRIM31Q9BZY9 425 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 BPESC1Q9GZL8 116 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 C10orf88Q9H8K7 445 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 ZDHHC11Q9H8X9 412 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 VPS37BQ9H9H4 285 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 ROPN1Q9HAT0 212 aaPredicted RBP2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 PAPOLBQ9NRJ5 636 aaKnown RBP2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 TREX1Q9NSU2 369 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 TXLNGQ9NUQ3 528 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 NINJ2Q9NZG7 142 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 CPSF2Q9P2I0 782 aaKnown RBP2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 ADAM29Q9UKF5 820 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 NXT1Q9UKK6 140 aaKnown RBP2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 SOX13Q9UN79 622 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 KCNK6Q9Y257 313 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 LRCH1Q9Y2L9 728 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 TMEM98Q9Y2Y6 226 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 UTP11Q9Y3A2 253 aaKnown RBP2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 TCAF1Q9Y4C2 921 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 LSM4Q9Y4Z0 139 aaKnown RBP2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 SPO11Q9Y5K1 396 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 ACTL7BQ9Y614 415 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 COMMD10Q9Y6G5 202 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 AP1M2Q9Y6Q5 423 aa2.84□□□□□ -1.95
SCARNA13-201ENST00000516672 TLDC2A0PJX2 215 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 MGAT4DA6NG13 374 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 LRRC14BA6NHZ5 514 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 VSTM2BA6NLU5 285 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 FADS2P1A8MWK0 482 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 B4DSR2 109 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 E7ESA3 106 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 EIF3FO00303 357 aaPredicted RBP2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 AURKAO14965 403 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 CD3EAPO15446 510 aaKnown RBP2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ZSCAN9O15535 394 aaPredicted RBP2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 RGS14O43566 566 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 BUD23O43709 281 aaKnown RBP2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 PEX1O43933 1283 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 EDF1O60869 148 aaKnown RBP2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 COQ9O75208 318 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ENTPD5O75356 428 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ATP5HO75947 161 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 KRT36O76013 467 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 PSMG1O95456 288 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 EPPINO95925 133 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 PNPP00491 289 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 IGHG3P01860 377 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 FTH1P02794 183 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 SMIM18P0DKX4 95 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ICAM2P13598 275 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ATP1B2P14415 290 aaPredicted RBP2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ETS1P14921 441 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ZNF7P17097 686 aaPredicted RBP2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 PGAM1P18669 254 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 CD33P20138 364 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 RPS3P23396 243 aaKnown RBP eCLIP2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ACRV1P26436 265 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 CHATP28329 748 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 NDUFS1P28331 727 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ATP5DP30049 168 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 CCKARP32238 428 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 VHLP40337 213 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 CD151P48509 253 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 PCYT1AP49585 367 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC18A1P54219 525 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ARL4CP56559 192 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 BASP1P80723 227 aaKnown RBP2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 EEF1A2Q05639 463 aaKnown RBP2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 CALCOCO2Q13137 446 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 LSAMPQ13449 338 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 CUL3Q13618 768 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 GTF2H3Q13889 308 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 POU6F1Q14863 301 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 MEP1AQ16819 746 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ZSWIM7Q19AV6 140 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC5A12Q1EHB4 618 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 TUSC1Q2TAM9 212 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 CNPY1Q3B7I2 92 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ANKRD20A4Q4UJ75 823 aa2.83□□□□□ -1.96
SCARNA13-201ENST00000516672 ATP13A5Q4VNC0 1218 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms