RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PCP2Q8IVA1 136 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 LRRC52Q8N7C0 313 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 CLEC1AQ8NC01 280 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 ZNF680Q8NEM1 530 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 OR5M1Q8NGP8 315 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 NOC3LQ8WTT2 800 aaKnown RBP-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 CSPG4P5Q96PW8 444 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 AGXT2Q9BYV1 514 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 SPC25Q9HBM1 224 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 POLD4Q9HCU8 107 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 DMAP1Q9NPF5 467 aaPredicted RBP-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 RASSF1Q9NS23 344 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 PAG1Q9NWQ8 432 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 RAI14Q9P0K7 980 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 WDR45Q9Y484 360 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 TECTAO75443 2155 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 FLNAP21333 2647 aaKnown RBP-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 TET2Q6N021 2002 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 ABCA2Q9BZC7 2435 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 OR5H15A6NDH6 313 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 ANKUB1A6NFN9 424 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 G3V4G9 280 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 SS18L1O75177 396 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 CTAG2O75638 210 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 NOL4O94818 638 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 S1PR2O95136 353 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 AIFM1O95831 613 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 IGHV3-48P01763 117 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 TLX1NBP0CAT3 122 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 F3P13726 295 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 PVRP15151 417 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 PSMC3P17980 439 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 ACP1P24666 158 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 DUTP33316 252 aaKnown RBP-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 ADD2P35612 726 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 CETN2P41208 172 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 GARSP41250 739 aaKnown RBP-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 RBX1P62877 108 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 CNTN2Q02246 1040 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 FRG1Q14331 258 aaKnown RBP-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 TIGD6Q17RP2 521 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 KCTD11Q693B1 232 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 LRRC75AQ8NAA5 344 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 NECAP1Q8NC96 275 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 TSKUQ8WUA8 353 aa-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 RANBP17Q9H2T7 1088 aaKnown RBP-1.81□□□□□ -2.7
RNU6-539P-201ENST00000516665 FAT1Q14517 4588 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 IGKV1D-42A0A075B6H8 117 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 C19orf71A6NCJ1 209 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 CASTOR2A6NHX0 329 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 MLNRO43193 412 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 RBFOX2O43251 390 aaKnown RBP eCLIP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 PPIP5K2O43314 1243 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 DUSP11O75319 330 aaKnown RBP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 RSL1D1O76021 490 aaKnown RBP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 IGHV2-70P01814 119 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 SNRPCP09234 159 aaKnown RBP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 PDGFRBP09619 1106 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 IRF2P14316 349 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 RPL8P62917 257 aaKnown RBP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 KRT83P78385 493 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 TMEM115Q12893 351 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 RSPO1Q2MKA7 263 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 MCMDC2Q4G0Z9 681 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 MS4A13Q5J8X5 152 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 SDE2Q6IQ49 451 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 PRSS48Q7RTY5 328 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 PIANPQ8IYJ0 282 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 ELMOD1Q8N336 334 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 ACBD4Q8NC06 268 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 OR2AP1Q8NGE2 309 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 RPUSD4Q96CM3 377 aaKnown RBP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 C5orf30Q96GV9 206 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 PCDHB18PQ96TA0 734 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 RNF5Q99942 180 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 APOL6Q9BWW8 343 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 NAA15Q9BXJ9 866 aaKnown RBP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 MRPL32Q9BYC8 188 aaKnown RBP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 KAT8Q9H7Z6 458 aaKnown RBP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 ELL3Q9HB65 397 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 ZNF355PQ9NSJ1 428 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 IKZF2Q9UKS7 526 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 NME7Q9Y5B8 376 aa-1.82□□□□□ -2.7
RNU6-539P-201ENST00000516665 TMCO5BA8MYB1 307 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 ZNF732B4DXR9 585 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 EIF3CLB5ME19 914 aaKnown RBP-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 H0YL77 283 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 ZNF263O14978 683 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 TBL1XO60907 577 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 GUCY1B2O75343 617 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 CSDE1O75534 798 aaKnown RBP-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 FHP07954 510 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 PRLRP16471 622 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 MPZP25189 248 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 ABCD1P33897 745 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 SLC9A3P48764 834 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 NLRP11P59045 1033 aaKnown RBP-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 TFAP4Q01664 338 aa-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 OTUD4Q01804 1114 aaKnown RBP-1.83□□□□□ -2.7
RNU6-539P-201ENST00000516665 RALGDSQ12967 914 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms