RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ANKRD49Q8WVL7 239 aa-1.51□□□□□ -2.65
RNU6-542P-201ENST00000516405 SDCCAG3Q96C92 435 aa-1.51□□□□□ -2.65
RNU6-542P-201ENST00000516405 AGXT2Q9BYV1 514 aa-1.51□□□□□ -2.65
RNU6-542P-201ENST00000516405 NARFLQ9H6Q4 476 aa-1.51□□□□□ -2.65
RNU6-542P-201ENST00000516405 PRKRIP1Q9H875 184 aaPredicted RBP-1.51□□□□□ -2.65
RNU6-542P-201ENST00000516405 DMAP1Q9NPF5 467 aaPredicted RBP-1.51□□□□□ -2.65
RNU6-542P-201ENST00000516405 MBD2Q9UBB5 411 aa-1.51□□□□□ -2.65
RNU6-542P-201ENST00000516405 IL36AQ9UHA7 158 aa-1.51□□□□□ -2.65
RNU6-542P-201ENST00000516405 C19orf71A6NCJ1 209 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 NEDD8-MDP1E9PL57 170 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 OGG1O15527 345 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 PSMD3O43242 534 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 DUSP11O75319 330 aaKnown RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 CREG1O75629 220 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 SLC25A12O75746 678 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 MOSP00540 346 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 PGK1P00558 417 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 IGHV3-48P01763 117 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 IL4P05112 153 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 F3P13726 295 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 CD59P13987 128 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 PVRP15151 417 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 ABCB4P21439 1286 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 ACP1P24666 158 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 PDIA3P30101 505 aaKnown RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 GABRA5P31644 462 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 DUTP33316 252 aaKnown RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 GARSP41250 739 aaKnown RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 BACE1P56817 501 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 CNTN2Q02246 1040 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 LCP2Q13094 533 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 IFIT5Q13325 482 aaKnown RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 PSG5Q15238 335 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 RSPO1Q2MKA7 263 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 KRTAP19-8Q3LI54 63 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 FAM98BQ52LJ0 330 aaKnown RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 ADNP2Q6IQ32 1131 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 USP50Q70EL3 339 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 MOGAT3Q86VF5 341 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 OR2C3Q8N628 320 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 LRRC52Q8N7C0 313 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 LRRC75AQ8NAA5 344 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 CLEC1AQ8NC01 280 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 OR5M1Q8NGP8 315 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 VPS33AQ96AX1 596 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 NSUN4Q96CB9 384 aaKnown RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 GAD1Q99259 594 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 APOL6Q9BWW8 343 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 TSSK1BQ9BXA7 367 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 MRPL32Q9BYC8 188 aaKnown RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 INTS2Q9H0H0 1204 aaKnown RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 KAT8Q9H7Z6 458 aaKnown RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 DNAJC18Q9H819 358 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 ZNF355PQ9NSJ1 428 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 TAS2R14Q9NYV8 317 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 RAI14Q9P0K7 980 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 SLC2A6Q9UGQ3 507 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 GRIP1Q9Y3R0 1128 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 WDR45Q9Y484 360 aa-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 RSF1Q96T23 1441 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-542P-201ENST00000516405 A0A1W2PQF6 199 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 OR5H15A6NDH6 313 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 C4orf51C9J302 202 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 ZNF263O14978 683 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 RBFOX2O43251 390 aaKnown RBP eCLIP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 PPIP5K2O43314 1243 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 RTN3O95197 1032 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 NAPSAO96009 420 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 COL4A2P08572 1712 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 SNRPCP09234 159 aaKnown RBP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 CNPP09543 421 aaKnown RBP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 OR2T7P0C7T2 308 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 PSMC3P17980 439 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 CETN2P41208 172 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 ALDH3A2P51648 485 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 RPL8P62917 257 aaKnown RBP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 PITPNAQ00169 270 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 MCMDC2Q4G0Z9 681 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 DOPEY1Q5JWR5 2465 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 WDR45BQ5MNZ6 344 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 ACER2Q5QJU3 275 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 RARS2Q5T160 578 aaKnown RBP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 TNS2Q63HR2 1409 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 BHLHA15Q7RTS1 189 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 GSTA5Q7RTV2 222 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 SBSPONQ8IVN8 264 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 ZNF557Q8N988 423 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 ATG16L2Q8NAA4 619 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 CHDHQ8NE62 594 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 OR2AP1Q8NGE2 309 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 CD99L2Q8TCZ2 262 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 FAM151AQ8WW52 585 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 RPUSD4Q96CM3 377 aaKnown RBP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 C5orf30Q96GV9 206 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 RNF5Q99942 180 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 TIMM29Q9BSF4 260 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 RANBP17Q9H2T7 1088 aaKnown RBP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 SCPEP1Q9HB40 452 aa-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 CENPJQ9HC77 1338 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-542P-201ENST00000516405 PAG1Q9NWQ8 432 aa-1.53□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms