RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 TIGD3Q6B0B8 471 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 GRHL2Q6ISB3 625 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 LRRC75A-AS1Q8N1F1 130 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 VWA5B2Q8N398 1253 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 RNF175Q8N4F7 328 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 FAM83FQ8NEG4 500 aaPredicted RBP14.37□□□□□ -0.11
LMNA-223ENST00000515459 OR1J4Q8NGS1 313 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 HUS1BQ8NHY5 278 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 ZNF592Q92610 1267 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 NTNG2Q96CW9 530 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 ZFP3Q96NJ6 502 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 TM9SF2Q99805 663 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 WDR41Q9HAD4 459 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 LYARQ9NX58 379 aaKnown RBP14.37□□□□□ -0.11
LMNA-223ENST00000515459 OPTCQ9UBM4 332 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 FETUBQ9UGM5 382 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 EIF3LQ9Y262 564 aaKnown RBP14.37□□□□□ -0.11
LMNA-223ENST00000515459 DNHD1Q96M86 4753 aa14.37□□□□□ -0.11
LMNA-223ENST00000515459 A0A1W2PR48 441 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 KIAA1324LA8MWY0 1029 aaPredicted RBP14.36□□□□□ -0.11
LMNA-223ENST00000515459 K7EPI3 171 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 GNB5O14775 395 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 SMPD2O60906 423 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 CDH16O75309 829 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 PIAS1O75925 651 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 NR2F6P10588 404 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 PTPN6P29350 595 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 CYP20A1Q6UW02 462 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 STAG3L4Q8TBR4 150 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 PIGTQ969N2 578 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 UBXN10Q96LJ8 280 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 MTERF1Q99551 399 aaKnown RBP14.36□□□□□ -0.11
LMNA-223ENST00000515459 PIP5K1AQ99755 562 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 ACBD3Q9H3P7 528 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 CXorf21Q9HAI6 301 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 SMYD2Q9NRG4 433 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 TXNDC16Q9P2K2 825 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 NDRG3Q9UGV2 375 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 SNX12Q9UMY4 172 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 TSC22D4Q9Y3Q8 395 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 ASB4Q9Y574 426 aa14.36□□□□□ -0.11
LMNA-223ENST00000515459 A0A0A6YYD5 115 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 E7ESA3 106 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 H7C1Q1 480 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 RCBTB2O95199 551 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 CPN1P15169 458 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 EPB42P16452 691 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 KRT15P19012 456 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 PTX3P26022 381 aaPredicted RBP14.35□□□□□ -0.11
LMNA-223ENST00000515459 PCSK6P29122 969 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 SOX18P35713 384 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 FUT7Q11130 342 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 MRM1Q6IN84 353 aaKnown RBP14.35□□□□□ -0.11
LMNA-223ENST00000515459 ANGPTL8Q6UXH0 198 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 CAPN12Q6ZSI9 719 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 YRDCQ86U90 279 aaKnown RBP14.35□□□□□ -0.11
LMNA-223ENST00000515459 MYLK4Q86YV6 388 aaPredicted RBP14.35□□□□□ -0.11
LMNA-223ENST00000515459 GALNT12Q8IXK2 581 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 ZBED8Q8IZ13 594 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 PRR22Q8IZ63 422 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 SLC35F6Q8N357 371 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 CIARTQ8N365 385 aaPredicted RBP14.35□□□□□ -0.11
LMNA-223ENST00000515459 SIMC1Q8NDZ2 872 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 C17orf47Q8NEP4 570 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 SLC44A1Q8WWI5 657 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 CDKL2Q92772 493 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 ADIPOR1Q96A54 375 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 GPR22Q99680 433 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 TUBA1CQ9BQE3 449 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 BDH2Q9BUT1 245 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 ZNF717Q9BY31 904 aaPredicted RBP14.35□□□□□ -0.11
LMNA-223ENST00000515459 OR10A5Q9H207 317 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 PIGMQ9H3S5 423 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 ALG9Q9H6U8 611 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 METTL7AQ9H8H3 244 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 NUDT4Q9NZJ9 180 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 JMJD1CQ15652 2540 aa14.35□□□□□ -0.11
LMNA-223ENST00000515459 SUPT3HB4E1H0 165 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 H0Y3Z8 333 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 TMPRSS11DO60235 418 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 SUPT3HO75486 399 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 EEDO75530 441 aaKnown RBP14.34□□□□□ -0.11
LMNA-223ENST00000515459 SEC31AO94979 1220 aaKnown RBP14.34□□□□□ -0.11
LMNA-223ENST00000515459 AIFM1O95831 613 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 ABCB1P08183 1280 aaPredicted RBP14.34□□□□□ -0.11
LMNA-223ENST00000515459 FAM58BPP0C7Q3 252 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 PIK3R1P27986 724 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 ABCD3P28288 659 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 BSGP35613 385 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 DIO3P55073 304 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 RAB10P61026 200 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 RPS13P62277 151 aaKnown RBP14.34□□□□□ -0.11
LMNA-223ENST00000515459 PHEXP78562 749 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 DR1Q01658 176 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 GAB1Q13480 694 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 ZKSCAN8Q15776 578 aaPredicted RBP14.34□□□□□ -0.11
LMNA-223ENST00000515459 OR52E8Q6IFG1 317 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 SCIMPQ6UWF3 145 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 ENPP6Q6UWR7 440 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 PRSS57Q6UWY2 283 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms