RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 GALR2O43603 387 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 STX11O75558 287 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ABLIM3O94929 683 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 PAK4O96013 591 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 APOC3P02656 99 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 RHOCP08134 193 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 CNPP09543 421 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 TMIGD3P0DMS9 266 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 MYF6P23409 242 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ATP5A1P25705 553 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 CA5AP35218 305 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 LSM3P62310 102 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ANGPT1Q15389 498 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ATP6AP1Q15904 470 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 BAK1Q16611 211 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ZNF528Q3MIS6 628 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ZNF773Q6PK81 442 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ATRAIDQ6UW56 229 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 RBM23Q86U06 439 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ZZZ3Q8IYH5 903 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 C9orf62Q8N4C0 152 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ARRDC1Q8N5I2 433 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 LRRC17Q8N6Y2 441 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ZNF454Q8N9F8 522 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 OR14C36Q8NHC7 312 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 MCFD2Q8NI22 146 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 CD200R1Q8TD46 325 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 C22orf15Q8WYQ4 148 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 GCDHQ92947 438 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 CLP1Q92989 425 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 MISP3Q96FF7 219 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 SCLYQ96I15 445 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 UHRF1Q96T88 793 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 KCNJ15Q99712 375 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 TMEM121BQ9BXQ6 578 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 GAREM1Q9H706 876 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 SEC14L4Q9UDX3 406 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 UBQLN2Q9UHD9 624 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 POFUT2Q9Y2G5 429 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 BACE2Q9Y5Z0 518 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 A0A0J9YYE9 177 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 C9orf170A2RU37 121 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ASPDHA6ND91 283 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 URADA6NGE7 173 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 CBX4O00257 560 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 NME4O00746 187 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 OR10H2O60403 315 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 TSPAN3O60637 253 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 GADD45GO95257 159 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 MC4RP32245 332 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 CSNK1DP48730 415 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 AGTR2P50052 363 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 NUDT6P53370 316 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 NUTF2P61970 127 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 LCP2Q13094 533 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 CHRNA6Q15825 494 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 XKR7Q5GH72 579 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 RNF219Q5W0B1 726 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 NCEH1Q6PIU2 408 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 LINGO4Q6UY18 593 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 FAM92BQ6ZTR7 304 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 SZRD1Q7Z422 152 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 NRARPQ7Z6K4 114 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 ZFP82Q8N141 532 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 SIDT2Q8NBJ9 832 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 OR6X1Q8NH79 312 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 WDR36Q8NI36 951 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 WFDC5Q8TCV5 224 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 TNFRSF14Q92956 283 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 S100PBPQ96BU1 408 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 VWCEQ96DN2 955 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 MAPKAP1Q9BPZ7 522 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 CCDC90BQ9GZT6 254 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 NOL11Q9H8H0 719 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 SEMA4BQ9NPR2 832 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 SDR39U1Q9NRG7 319 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 TAS2R13Q9NYV9 303 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 DNAJB9Q9UBS3 223 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 GPR160Q9UJ42 338 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 PCTPQ9UKL6 214 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 BTRCQ9Y297 605 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 TP53TG5Q9Y2B4 290 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 OR51B4Q9Y5P0 310 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 NUBP2Q9Y5Y2 271 aa7.11□□□□□ -1.27
PDLIM5-219ENST00000514743 BLACEA4D250 179 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 SUPT3HB4E1H0 165 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 SMLR1H3BR10 107 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 MATN4O95460 622 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 CXCL10P02778 98 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 SPI1P17947 270 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 LBPP18428 481 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 POLR2IP36954 125 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 HLCSP50747 726 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 CLCNKAP51800 687 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 NOGQ13253 232 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 PTPRNQ16849 979 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 FAM109BQ6ICB4 259 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 FRMPD2BQ6IN97 320 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 NPSR1Q6W5P4 371 aa7.1□□□□□ -1.27
PDLIM5-219ENST00000514743 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.1□□□□□ -1.273e-8■■■□□ 14.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms