RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 MSANTD1Q6ZTZ1 278 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 LANCL3Q6ZV70 420 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 ASB18Q6ZVZ8 466 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 PAGE2Q7Z2X7 111 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 ARPINQ7Z6K5 226 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 NUDT13Q86X67 352 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 SLC15A3Q8IY34 581 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 METTL4Q8N3J2 472 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 TANKQ92844 425 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 TMEM125Q96AQ2 219 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 TESCQ96BS2 214 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 THOC3Q96J01 351 aaKnown RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 AGAP4Q96P64 663 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 LMF1Q96S06 567 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 LPAR4Q99677 370 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 SMAD5Q99717 465 aaKnown RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 SORBS1Q9BX66 1292 aaKnown RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 ZNF717Q9BY31 904 aaPredicted RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 ALOXE3Q9BYJ1 711 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 RBCK1Q9BYM8 510 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 CLMPQ9H6B4 373 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 ZNF552Q9H707 407 aaPredicted RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 LRTM1Q9HBL6 345 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 NECTIN3Q9NQS3 549 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 FARSBQ9NSD9 589 aaKnown RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 LYARQ9NX58 379 aaKnown RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 PLA2G2EQ9NZK7 142 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 VPS29Q9UBQ0 182 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 PHF11Q9UIL8 331 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 ADAM29Q9UKF5 820 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 FBXW2Q9UKT8 454 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 EIF3LQ9Y262 564 aaKnown RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 ZNF451Q9Y4E5 1061 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 ASB4Q9Y574 426 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 IGKV3D-11A0A0A0MRZ8 115 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 A0A0A6YYD5 115 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 IGHV3-20A0A0C4DH32 117 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 TCRBV16S1A1N1A0A5B0 115 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 ARHGAP10A1A4S6 786 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 CCDC154A6NI56 674 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 H0Y3Z8 333 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 K7EM74 188 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 NME4O00746 187 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 CFLARO15519 480 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 GUCY1B2O75343 617 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 SEC24DO94855 1032 aaPredicted RBP7.78□□□□□ -1.16
CCL28-204ENST00000514421 PRB1P04280 392 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 ALPPP05187 535 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 IL6P05231 212 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 KLK1P06870 262 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 FAM58BPP0C7Q3 252 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 BCKDHAP12694 445 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 ACADSP16219 412 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 HOXB9P17482 250 aaPredicted RBP7.78□□□□□ -1.16
CCL28-204ENST00000514421 MAOAP21397 527 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 CLDN8P56748 225 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 EEFSECP57772 596 aaKnown RBP7.78□□□□□ -1.16
CCL28-204ENST00000514421 C19orf57Q0VDD7 668 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 Q0VFX4 171 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 STX4Q12846 297 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 KLRB1Q12918 225 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 BNIP2Q12982 314 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 SLC13A2Q13183 592 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 RAPSNQ13702 412 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 SERTAD2Q14140 314 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 EXT1Q16394 746 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 PAGE3Q5JUK9 113 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 CCNYL2Q5T2Q4 361 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 PLAG1Q6DJT9 500 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 LCN8Q6JVE9 175 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 PAPD4Q6PIY7 484 aaKnown RBP7.78□□□□□ -1.16
CCL28-204ENST00000514421 SCIMPQ6UWF3 145 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 DHDDSQ86SQ9 333 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 RIMKLAQ8IXN7 391 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 ZNF843Q8N446 348 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 TEX19Q8NA77 164 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 TMEM52Q8NDY8 209 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 M1APQ8TC57 530 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 CHTF18Q8WVB6 975 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 TSLPQ969D9 159 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 CCDC124Q96CT7 223 aaKnown RBP7.78□□□□□ -1.16
CCL28-204ENST00000514421 WDR77Q9BQA1 342 aaPredicted RBP7.78□□□□□ -1.16
CCL28-204ENST00000514421 NUDT9Q9BW91 350 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 RPF2Q9H7B2 306 aaKnown RBP7.78□□□□□ -1.16
CCL28-204ENST00000514421 CMTM6Q9NX76 183 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 TP53TG5Q9Y2B4 290 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 ATG4BQ9Y4P1 393 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 GMEB1Q9Y692 573 aa7.78□□□□□ -1.16
CCL28-204ENST00000514421 ATMQ13315 3056 aa7.77□□□□□ -1.16
CCL28-204ENST00000514421 TRBV5-3A0A0A0MS03 114 aa7.77□□□□□ -1.17
CCL28-204ENST00000514421 AQP12BA6NM10 295 aa7.77□□□□□ -1.17
CCL28-204ENST00000514421 A8MUA0 341 aa7.77□□□□□ -1.17
CCL28-204ENST00000514421 B8ZZF3 427 aa7.77□□□□□ -1.17
CCL28-204ENST00000514421 TMPRSS11DO60235 418 aa7.77□□□□□ -1.17
CCL28-204ENST00000514421 DPM1O60762 260 aa7.77□□□□□ -1.17
CCL28-204ENST00000514421 SEC22BO75396 215 aa7.77□□□□□ -1.17
CCL28-204ENST00000514421 GBAP04062 536 aa7.77□□□□□ -1.17
CCL28-204ENST00000514421 PDGFAP04085 211 aa7.77□□□□□ -1.17
CCL28-204ENST00000514421 TNNI3P19429 210 aa7.77□□□□□ -1.17
CCL28-204ENST00000514421 ATP6V1C1P21283 382 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms