RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CASP2P42575 452 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 PTH2RP49190 550 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 STARP49675 285 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 DIO3P55073 304 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 PPP1R7Q15435 360 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 DEPDC1Q5TB30 811 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 HLA-DQA1Q5Y7H0 255 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 ADGRE4PQ86SQ3 457 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 GPSM1Q86YR5 675 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 TRIM42Q8IWZ5 723 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 TCAIMQ8N3R3 496 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 RDH11Q8TC12 318 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 WNT2BQ93097 391 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 TP53INP1Q96A56 240 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 NTNG2Q96CW9 530 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 ZFP3Q96NJ6 502 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 SECISBP2Q96T21 854 aaKnown RBP18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 PACSIN3Q9UKS6 424 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 DNALI1O14645 258 aaPredicted RBP18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 TNFSF13O75888 250 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 SMNDC1O75940 238 aaKnown RBP eCLIP18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 DDX39BQ13838 428 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 SULT1C3Q6IMI6 304 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 MED27Q6P2C8 311 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 PHC2Q8IXK0 858 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 TRIM58Q8NG06 486 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 CMTM7Q96FZ5 175 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 FAM111AQ96PZ2 611 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 PELOQ9BRX2 385 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 MED18Q9BUE0 208 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 METTL7AQ9H8H3 244 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 SERHLQ9NQF3 203 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 ZNF226Q9NYT6 803 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 FETUBQ9UGM5 382 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 ASIC3Q9UHC3 531 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 PHF11Q9UIL8 331 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 MAPRE3Q9UPY8 281 aa18.46■□□□□ 0.55
SQSTM1-215ENST00000514093 DSCAMO60469 2012 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 CUBNO60494 3623 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 PLPP1O14494 284 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 TGM6O95932 706 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 BUD31P41223 144 aaPredicted RBP18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 TMED10P49755 219 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 RAP1GDS1P52306 607 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 NR1H2P55055 460 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 NRG3P56975 720 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 KRTAP1-1Q07627 177 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 GAB1Q13480 694 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 OR4D1Q15615 310 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 TBCCQ15814 346 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 KBTBD12Q3ZCT8 623 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 ZNF550Q7Z398 422 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 MED12LQ86YW9 2145 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 LAS2Q8IYD9 372 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 MAPK1IP1LQ8NDC0 245 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 OR7G3Q8NG95 312 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 OR14L1PQ8NHC6 308 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 EXT2Q93063 718 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 ADIPOR1Q96A54 375 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 RGMAQ96B86 450 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 ZC3HAV1LQ96H79 300 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 GSX2Q9BZM3 304 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 DERL2Q9GZP9 239 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 CAB39LQ9H9S4 337 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 GALNT9Q9HCQ5 603 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 CD274Q9NZQ7 290 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 CLCF1Q9UBD9 225 aa18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 CHD3Q12873 2000 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-215ENST00000514093 A0A1W2PNV4 684 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 A0A1W2PR48 441 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 PIAS1O75925 651 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 ABCB1P08183 1280 aaPredicted RBP18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 CT62P0C5K7 136 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 KRT15P19012 456 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 CRYGSP22914 178 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 GCKP35557 465 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 RPS13P62277 151 aaKnown RBP18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 RPP38P78345 283 aaKnown RBP18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 NNATQ16517 81 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 STEAP4Q687X5 459 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 HMBOX1Q6NT76 420 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 C20orf204Q6ZNR8 217 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 ANKMY2Q8IV38 441 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 GRK7Q8WTQ7 553 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 UBE2E3Q969T4 207 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 UCN2Q96RP3 112 aa18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 RYDENQ9NUL5 291 aaKnown RBP18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 PTBP2Q9UKA9 531 aaKnown RBP18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 SONP18583 2426 aaKnown RBP18.44■□□□□ 0.54
SQSTM1-215ENST00000514093 MSTNO14793 375 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 TMPRSS11DO60235 418 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 ICOSLGO75144 302 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 EEDO75530 441 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 SLC35E2BP0CK96 405 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 SLC35E2P0CK97 266 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 CCDC166P0CW27 439 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 ABCD3P28288 659 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 MGAT5Q09328 741 aa18.43■□□□□ 0.54
SQSTM1-215ENST00000514093 VWA1Q6PCB0 445 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms