RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 NDC80O14777 642 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 CASKO14936 926 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 STX7O15400 261 aaKnown RBP3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ZNHIT1O43257 154 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 HS6ST1O60243 411 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 GFPT2O94808 682 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 IGHG3P01860 377 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 MT-ND5P03915 603 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 HLA-DQB2P05538 268 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 PIRTP0C851 137 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 TPBGLP0DKB5 382 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 GZMAP12544 262 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 CHRM3P20309 590 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 CD9P21926 228 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 IL10P22301 178 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ACADLP28330 430 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 PDHA2P29803 388 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 AKT1P31749 480 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 TNNT3P45378 269 aaPredicted RBP3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 PCYT1AP49585 367 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 HLCSP50747 726 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 VSX2P58304 361 aaPredicted RBP3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 IFI35P80217 286 aaPredicted RBP3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 MPP1Q00013 466 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 RELAQ04206 551 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 DMTNQ08495 405 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 PTK6Q13882 451 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 FAM53BQ14153 422 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 PIGHQ14442 188 aaPredicted RBP3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 NAA25Q14CX7 972 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ACKR1Q16570 336 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 GPR33Q49SQ1 333 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ZNF658BQ4V348 819 aaPredicted RBP3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 PCID2Q5JVF3 399 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 NDUFAF5Q5TEU4 345 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 RTL6Q6ICC9 239 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 FIGLAQ6QHK4 219 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 SUSD1Q6UWL2 747 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 DEF8Q6ZN54 512 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 MAVSQ7Z434 540 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 MAATS1Q7Z4T9 603 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 TRIM73Q86UV7 250 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 MAP7D3Q8IWC1 876 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 SLC15A3Q8IY34 581 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 SPARTQ8N0X7 666 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 LIX1Q8N485 282 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 RPRMLQ8N4K4 120 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 OR2C3Q8N628 320 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 LMNTD1Q8N9Z9 388 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 PLPP5Q8NEB5 264 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 OR56A3Q8NH54 315 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ELP5Q8TE02 316 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ROBO4Q8WZ75 1007 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ULK4Q96C45 1275 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 NTNG2Q96CW9 530 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 COPS8Q99627 209 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 LPAR4Q99677 370 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 NPAS2Q99743 824 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 AGPAT1Q99943 283 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 FSD1LQ9BXM9 530 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 SLCO5A1Q9H2Y9 848 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 CLSTN2Q9H4D0 955 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 CDCP1Q9H5V8 836 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 XKR8Q9H6D3 395 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ASB8Q9H765 288 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ZDHHC11Q9H8X9 412 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 LRTM1Q9HBL6 345 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 DUSP22Q9NRW4 184 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 MRPS18AQ9NVS2 196 aaKnown RBP3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 TMEM160Q9NX00 188 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 MYO1AQ9UBC5 1043 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 NDRG4Q9ULP0 352 aaKnown RBP3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 CAPN11Q9UMQ6 739 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 EIF3LQ9Y262 564 aaKnown RBP3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ASF1AQ9Y294 204 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 TTLL3Q9Y4R7 772 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 FAM215AQ9Y5M1 114 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 SCINQ9Y6U3 715 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 MAU2Q9Y6X3 613 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 FAM169AQ9Y6X4 670 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 ABCA1O95477 2261 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 DSCAMO60469 2012 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 IGLV3-16A0A075B6K0 115 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 A0A0G2JK05 382 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 A0A0U1RQJ8 604 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 C5orf60A6NFR6 353 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 TRIM64A6NGJ6 449 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 TRIM64BA6NI03 449 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 C2orf81A6NN90 581 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 GAPDHSO14556 408 aaPredicted RBP3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 APOL1O14791 398 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 KPNA5O15131 536 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 CD5LO43866 347 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 CDC40O60508 579 aaKnown RBP eCLIP3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 VPS26AO75436 327 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 SRP72O76094 671 aaKnown RBP3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 AP2A2O94973 939 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 SOX30O94993 753 aa3.36□□□□□ -1.87
PDLIM5-218ENST00000513341 TJP3O95049 919 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms