RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 HTR5AP47898 357 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 GNG10P50151 68 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 RBBP4Q09028 425 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 POU4F2Q12837 409 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 SKP2Q13309 424 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 KRT33BQ14525 404 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 MANEAQ5SRI9 462 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 GCNT6Q5T4J0 391 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 GPRC6AQ5T6X5 926 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 RAET1GQ6H3X3 334 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 OR5M10Q6IEU7 315 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 MSRB3Q8IXL7 192 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 C1orf52Q8N6N3 182 aaKnown RBP6.96□□□□□ -1.3
CPNE4-208ENST00000511604 MCPH1Q8NEM0 835 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 NLGN2Q8NFZ4 835 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 OR9Q1Q8NGQ5 310 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 TCTEX1D2Q8WW35 142 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 HSD17B8Q92506 261 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 POP5Q969H6 163 aaKnown RBP6.96□□□□□ -1.3
CPNE4-208ENST00000511604 NTAN1Q96AB6 310 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 MISP3Q96FF7 219 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 LRR1Q96L50 414 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 MRPL37Q9BZE1 423 aaKnown RBP6.96□□□□□ -1.3
CPNE4-208ENST00000511604 TWSG1Q9GZX9 223 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.96□□□□□ -1.3
CPNE4-208ENST00000511604 TMPRSS5Q9H3S3 457 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 RNF122Q9H9V4 155 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 TCF7L1Q9HCS4 588 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 CNOT2Q9NZN8 540 aaKnown RBP6.96□□□□□ -1.3
CPNE4-208ENST00000511604 OR6C2Q9NZP2 312 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 CFAP97Q9P2B7 532 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 FZD10Q9ULW2 581 aa6.96□□□□□ -1.3
CPNE4-208ENST00000511604 LSM2Q9Y333 95 aaKnown RBP6.96□□□□□ -1.3
CPNE4-208ENST00000511604 BTBD17A6NE02 478 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 URADA6NGE7 173 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 NCF1BA6NI72 391 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 NCF1CA8MVU1 366 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 RFXAPO00287 272 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 CACNB4O00305 520 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF197O14709 1029 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 SUSD5O60279 629 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 OR1I1O60431 355 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 PRSS56P0CW18 603 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF44P15621 663 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 PPP3CBP16298 524 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ANXA7P20073 488 aaKnown RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ETV5P41161 510 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 AVPR1BP47901 424 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 PXNP49023 591 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 RGS4P49798 205 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 STK19P49842 368 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 DGKEP52429 567 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 CASP9P55211 416 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 CAV3P56539 151 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 TIAL1Q01085 375 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 UBXN2BQ14CS0 331 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 SPHARQ15513 63 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ATP13A5Q4VNC0 1218 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 MIA3Q5JRA6 1907 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 FAM182BQ5T319 152 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ANKS6Q68DC2 871 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 RPL13AP3Q6NVV1 102 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 LCLAT1Q6UWP7 414 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 SEZ6L2Q6UXD5 910 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 LRRN1Q6UXK5 716 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 FAM122BQ7Z309 247 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 TAC4Q86UU9 113 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 MISPQ8IVT2 679 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 CNTN4Q8IWV2 1026 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ARMC10Q8N2F6 343 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 MEIOBQ8N635 442 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 PLA2G15Q8NCC3 412 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 MDGA1Q8NFP4 955 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 OR10K1Q8NGX5 313 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 OR52P1PQ8NH57 321 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 CHTF18Q8WVB6 975 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 CENPIQ92674 756 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 SLAMF9Q96A28 289 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF707Q96C28 371 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ZC3H10Q96K80 434 aaKnown RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 CHIAQ9BZP6 476 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 SPRTNQ9H040 489 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 OPN3Q9H1Y3 402 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ABHD16BQ9H3Z7 469 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 TMEM184CQ9NVA4 438 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 TMEM45AQ9NWC5 275 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 SLC25A37Q9NYZ2 338 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 FKBPLQ9UIM3 349 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 FBXL21Q9UKT6 434 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 TP53TG5Q9Y2B4 290 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ERI2A8K979 691 aaKnown RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 PRAMEF2O60811 474 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 CSO75390 466 aaKnown RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 KRT33AO76009 404 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF682O95780 498 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 GLP2RO95838 553 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 TFP02787 698 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 IQCF3P0C7M6 154 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 SAGP10523 405 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ADRB3P13945 408 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms