RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 COLGALT1Q8NBJ5 622 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 C17orf47Q8NEP4 570 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 FAM222BQ8WU58 562 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 TMEM37Q8WXS4 190 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 TAF15Q92804 592 aaKnown RBP eCLIP2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 TMEM45BQ96B21 275 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 RAB3CQ96E17 227 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 NLNQ9BYT8 704 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 Q9HAA7 133 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 GNB4Q9HAV0 340 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 SPASTQ9UBP0 616 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 LHX3Q9UBR4 397 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 CLIP2Q9UDT6 1046 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 TUBGCP4Q9UGJ1 667 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 HOOK1Q9UJC3 728 aaKnown RBP2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 IKZF3Q9UKT9 509 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 SPATA2Q9UM82 520 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 PLA2G4CQ9UP65 541 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 NPC1L1Q9UHC9 1359 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 IGKV3D-20A0A0C4DH25 116 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 IGHV3-16A0A0C4DH30 117 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 EI24O14681 340 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 MCF2LO15068 1137 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 LRRTM2O43300 516 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 SSX5O60225 188 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 SH3BGRLO75368 114 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 SEC22BO75396 215 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 SEMA4FO95754 770 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 CCDC159P0C7I6 412 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 UCP1P25874 307 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 PRDX6P30041 224 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 TRIM23P36406 574 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 NUMBP49757 651 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 RAG2P55895 527 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC26A5P58743 744 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 MYBPC1Q00872 1141 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 ZFP36L1Q07352 338 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 CRMP1Q14194 572 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 HAGHQ16775 308 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 SHROOM1Q2M3G4 852 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 AGKQ53H12 422 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 WDR25Q64LD2 544 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 TATDN1Q6P1N9 297 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 CNSTQ6PJW8 725 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 REG3GQ6UW15 175 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 GPR142Q7Z601 462 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 YRDCQ86U90 279 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC22A16Q86VW1 577 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 PHC2Q8IXK0 858 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 ZNF619Q8N2I2 560 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 POM121L12Q8N7R1 296 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 BEST4Q8NFU0 473 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 U2AF1L4Q8WU68 220 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 CBWD1Q9BRT8 395 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 FTHL17Q9BXU8 183 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 ADGRL4Q9HBW9 690 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 NRN1Q9NPD7 142 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 MRPL11Q9Y3B7 192 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 ZNF175Q9Y473 711 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 ATG4BQ9Y4P1 393 aa2.73□□□□□ -1.97
TRAPPC11-207ENST00000511409 A0A0J9YVX5 310 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 A0A1W2PPR1 153 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 TRABD2BA6NFA1 517 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 CYB561D2O14569 222 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 ARPC1BO15143 372 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 PHF1O43189 567 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 HPP00738 406 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 HCKP08631 526 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 IL4RP24394 825 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 ACP1P24666 158 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 MAPK3P27361 379 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 BRCC3P46736 316 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 PGFP49763 221 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 TRA2BP62995 288 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 NOP14P78316 857 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 BNIP1Q12981 228 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 CYLC2Q14093 348 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 GAMTQ14353 236 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 ABRAXAS2Q15018 415 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC1A5Q15758 541 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 ANKRD55Q3KP44 614 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 ZNF506Q5JVG8 444 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 ACER2Q5QJU3 275 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 IL23RQ5VWK5 629 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 NEK5Q6P3R8 708 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 RFWD3Q6PCD5 774 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 DPY19L2P2Q6ZN68 376 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 TMEM26Q6ZUK4 368 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 MOB2Q70IA6 237 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 ADGRD2Q7Z7M1 963 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 GPBP1Q86WP2 473 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 CENPSQ8N2Z9 138 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 CSNK1G2-AS1Q8NCQ2 148 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 OR52J3Q8NH60 311 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 FCGR1BQ92637 280 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 P3H4Q92791 437 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 TMEM186Q96B77 213 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 ANKRD9Q96BM1 317 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 BIRC7Q96CA5 298 aa2.72□□□□□ -1.97
TRAPPC11-207ENST00000511409 CAPNS2Q96L46 248 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms