RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 DSCR10P59022 87 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 IRX1P78414 480 aaPredicted RBP5.71□□□□□ -1.5
USP53-206ENST00000510737 BRD3Q15059 726 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 KYNUQ16719 465 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 LCN10Q6JVE6 187 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 PWWP2BQ6NUJ5 590 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 LCLAT1Q6UWP7 414 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 SETD3Q86TU7 594 aaPredicted RBP5.71□□□□□ -1.5
USP53-206ENST00000510737 ZNF683Q8IZ20 524 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 ZADH2Q8N4Q0 377 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 SLC37A2Q8TED4 501 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 ISG20Q96AZ6 181 aaKnown RBP5.71□□□□□ -1.5
USP53-206ENST00000510737 SENP5Q96HI0 755 aaPredicted RBP5.71□□□□□ -1.5
USP53-206ENST00000510737 C9orf72Q96LT7 481 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 NEURL2Q9BR09 285 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 SNX10Q9Y5X0 201 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 PRSS21Q9Y6M0 314 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 SYNJ2BP-COX16A0A087WUM0 186 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 CALCAP01258 141 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 C9P02748 559 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 VDRP11473 427 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 POLR2CP19387 275 aaPredicted RBP5.7□□□□□ -1.5
USP53-206ENST00000510737 ZNF10P21506 573 aaPredicted RBP5.7□□□□□ -1.5
USP53-206ENST00000510737 CCR1P32246 355 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 GPD2P43304 727 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 GNPDA1P46926 289 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 TDGF1P3P51864 188 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 GFERP55789 205 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 ARL4CP56559 192 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 HMGN5P82970 282 aaKnown RBP5.7□□□□□ -1.5
USP53-206ENST00000510737 OTUD4Q01804 1114 aaKnown RBP5.7□□□□□ -1.5
USP53-206ENST00000510737 NFATC2Q13469 925 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 PDCD2Q16342 344 aaPredicted RBP5.7□□□□□ -1.5
USP53-206ENST00000510737 KNOP1Q1ED39 458 aaKnown RBP5.7□□□□□ -1.5
USP53-206ENST00000510737 TECRLQ5HYJ1 363 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 ATG16L1Q676U5 607 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 PNCKQ6P2M8 343 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.7□□□□□ -1.5
USP53-206ENST00000510737 PHC2Q8IXK0 858 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 SFRP1Q8N474 314 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 TTC39CQ8N584 583 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 SLC38A9Q8NBW4 561 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 OR2AP1Q8NGE2 309 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 FAM149B1Q96BN6 582 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 HSFY1Q96LI6 401 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 QRFPRQ96P65 431 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 TBC1D10AQ9BXI6 508 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 LIME1Q9H400 295 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 PDE7BQ9NP56 450 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 OGFRQ9NZT2 677 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 MPP6Q9NZW5 540 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 COX16Q9P0S2 106 aa5.7□□□□□ -1.5
USP53-206ENST00000510737 CGNQ9P2M7 1197 aaKnown RBP5.7□□□□□ -1.5
USP53-206ENST00000510737 ANK3Q12955 4377 aaKnown RBP5.7□□□□□ -1.5
USP53-206ENST00000510737 MYO7BQ6PIF6 2116 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 FLNAP21333 2647 aaKnown RBP5.69□□□□□ -1.5
USP53-206ENST00000510737 MXRA5Q9NR99 2828 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 SEC14L5O43304 696 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 RECQL5O94762 991 aaPredicted RBP5.69□□□□□ -1.5
USP53-206ENST00000510737 LY6G6DO95868 133 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 IGLV1-44P01699 117 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 CAPN1P07384 714 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 SLC2A3P11169 496 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 ZNF26P17031 533 aaPredicted RBP5.69□□□□□ -1.5
USP53-206ENST00000510737 OR1E1P30953 314 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 ACTR1BP42025 376 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 CA7P43166 264 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 TSFMP43897 325 aaKnown RBP5.69□□□□□ -1.5
USP53-206ENST00000510737 MAPK9P45984 424 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 RPL34P49207 117 aaKnown RBP5.69□□□□□ -1.5
USP53-206ENST00000510737 CDH15P55291 814 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 ACTR1AP61163 376 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 CSNK2A1P68400 391 aaPredicted RBP5.69□□□□□ -1.5
USP53-206ENST00000510737 CEBPEQ15744 281 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 UGP2Q16851 508 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 TMEM35AQ53FP2 167 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 SLC22A25Q6T423 547 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 SUSD1Q6UWL2 747 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 LEKR1Q6ZMV7 388 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 PQLC2Q6ZP29 291 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 SLC46A3Q7Z3Q1 461 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 CSNK2A3Q8NEV1 391 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 MR1Q95460 341 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 C18orf12Q96KH6 178 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 AGAP3Q96P47 875 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 PAK5Q9P286 719 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 FBXO2Q9UK22 296 aaPredicted RBP5.69□□□□□ -1.5
USP53-206ENST00000510737 KIAA1257Q9ULG3 409 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 ERVK-11Q9UQG0 969 aa5.69□□□□□ -1.5
USP53-206ENST00000510737 ILVBLA1L0T0 632 aa5.68□□□□□ -1.5
USP53-206ENST00000510737 C5orf60A6NFR6 353 aa5.68□□□□□ -1.5
USP53-206ENST00000510737 TOX3O15405 576 aaPredicted RBP5.68□□□□□ -1.5
USP53-206ENST00000510737 WISP2O76076 250 aa5.68□□□□□ -1.5
USP53-206ENST00000510737 GSRP00390 522 aa5.68□□□□□ -1.5
USP53-206ENST00000510737 FOLR1P15328 257 aa5.68□□□□□ -1.5
USP53-206ENST00000510737 CASP1P29466 404 aa5.68□□□□□ -1.5
USP53-206ENST00000510737 ARCN1P48444 511 aaKnown RBP5.68□□□□□ -1.5
USP53-206ENST00000510737 SNRPD1P62314 119 aaKnown RBP5.68□□□□□ -1.5
USP53-206ENST00000510737 IRX6P78412 446 aaPredicted RBP5.68□□□□□ -1.5
USP53-206ENST00000510737 ELP6Q0PNE2 266 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms