RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 CGNQ9P2M7 1197 aaKnown RBP3.65□□□□□ -1.83
DHFR-204ENST00000508282 SPASTQ9UBP0 616 aa3.65□□□□□ -1.83
DHFR-204ENST00000508282 ZNF256Q9Y2P7 627 aaPredicted RBP3.65□□□□□ -1.83
DHFR-204ENST00000508282 DHX29Q7Z478 1369 aaKnown RBP3.64□□□□□ -1.83
DHFR-204ENST00000508282 ATP9AO75110 1047 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 PEX11AO75192 247 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 UMPSP11172 480 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 PPP2R1AP30153 589 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 SFNP31947 248 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 CHRNA3P32297 505 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 OR1D2P34982 312 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 IST1P53990 364 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 LYZP61626 148 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 SLC3A1Q07837 685 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 C17orf58Q2M2W7 97 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 CCDC40Q4G0X9 1142 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 AGAP6Q5VW22 663 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 OLFML2AQ68BL7 652 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 CAPN13Q6MZZ7 669 aaPredicted RBP3.64□□□□□ -1.83
DHFR-204ENST00000508282 ZCCHC12Q6PEW1 402 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 KDELC1Q6UW63 502 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 PAMR1Q6UXH9 720 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 PPP1R42Q7Z4L9 355 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 AQP12AQ8IXF9 295 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 ELMOD2Q8IZ81 293 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 Q8N7P7 452 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 SAMD12Q8N8I0 201 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 CCNYQ8ND76 341 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 IPMKQ8NFU5 416 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 FBXO30Q8TB52 745 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 TMEM186Q96B77 213 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 PANX3Q96QZ0 392 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 TEX13BQ9BXU2 312 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 TEX13AQ9BXU3 409 aaPredicted RBP3.64□□□□□ -1.83
DHFR-204ENST00000508282 PNPLA3Q9NST1 481 aa3.64□□□□□ -1.83
DHFR-204ENST00000508282 TRMT6Q9UJA5 497 aaKnown RBP3.64□□□□□ -1.83
DHFR-204ENST00000508282 RRP15Q9Y3B9 282 aaKnown RBP3.64□□□□□ -1.83
DHFR-204ENST00000508282 ATP6AP2A0A1C7CYW4 349 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 ARHGAP42A6NI28 874 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 CSO75390 466 aaKnown RBP3.63□□□□□ -1.83
DHFR-204ENST00000508282 CSDE1O75534 798 aaKnown RBP3.63□□□□□ -1.83
DHFR-204ENST00000508282 CCDC159P0C7I6 412 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 AREGP15514 252 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 RPA1P27694 616 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 GALK2Q01415 458 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 MFGE8Q08431 387 aaPredicted RBP3.63□□□□□ -1.83
DHFR-204ENST00000508282 LCP2Q13094 533 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 SLC17A1Q14916 467 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 KRTAP13-3Q3SY46 172 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 LIPJQ5W064 366 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 ZNF600Q6ZNG1 722 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 CYP4V2Q6ZWL3 525 aaPredicted RBP3.63□□□□□ -1.83
DHFR-204ENST00000508282 ABCA7Q8IZY2 2146 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 ZNF491Q8N8L2 437 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 DENND6BQ8NEG7 585 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 RNASE8Q8TDE3 154 aaKnown RBP3.63□□□□□ -1.83
DHFR-204ENST00000508282 NSMCE2Q96MF7 247 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 MCCC1Q96RQ3 725 aaPredicted RBP3.63□□□□□ -1.83
DHFR-204ENST00000508282 ZNF559Q9BR84 538 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 ZBP1Q9H171 429 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 CUEDC2Q9H467 287 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 FAM212BQ9NTI7 297 aaPredicted RBP3.63□□□□□ -1.83
DHFR-204ENST00000508282 SLC35D1Q9NTN3 355 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 AATFQ9NY61 560 aaKnown RBP eCLIP3.63□□□□□ -1.83
DHFR-204ENST00000508282 MIS18AQ9NYP9 233 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 TRIM10Q9UDY6 481 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 EXOC7Q9UPT5 735 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 EXOC6BQ9Y2D4 811 aa3.63□□□□□ -1.83
DHFR-204ENST00000508282 A0A087X0K7 114 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 MAGEB16A2A368 324 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 FAM149AA5PLN7 773 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 CFAP73A6NFT4 308 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 ZNF487B1APH4 448 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 CCSO14618 274 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 SYT7O43581 403 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 SSX5O60225 188 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 OR6A2O95222 327 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 LY6G6DO95868 133 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 TGFAP01135 160 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 FOSL2P15408 326 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 GLRA1P23415 457 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 ACAA2P42765 397 aaKnown RBP3.62□□□□□ -1.83
DHFR-204ENST00000508282 ALDH3B1P43353 468 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 BRCC3P46736 316 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 CCR4P51679 360 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 SMSP52788 366 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 HMGCS2P54868 508 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 PRKCEQ02156 737 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 ARHGAP1Q07960 439 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 PDE7AQ13946 482 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 ABRAXAS2Q15018 415 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 MARC1Q5VT66 337 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 RSBN1Q5VWQ0 802 aaPredicted RBP3.62□□□□□ -1.83
DHFR-204ENST00000508282 KCTD11Q693B1 232 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 CASC1Q6TDU7 716 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 KLHDC8AQ8IYD2 350 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 ZNF444Q8N0Y2 327 aaPredicted RBP3.62□□□□□ -1.83
DHFR-204ENST00000508282 SLC34A3Q8N130 599 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 GMCL1P1Q8NEA9 526 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 OR52E1Q8NGJ3 308 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms