RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CDX1P47902 265 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 CCR6P51684 374 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 YWHAHQ04917 246 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 GRB14Q14449 540 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 SNAPC1Q16533 368 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 ZNF284Q2VY69 593 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 NDUFAF6Q330K2 333 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 OTUD3Q5T2D3 398 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 TRIQKQ629K1 86 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 TBC1D3GQ6DHY5 549 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 KIAA1161Q6NSJ0 714 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 IL20RBQ6UXL0 311 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 ZNF367Q7RTV3 350 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 KANSL1Q7Z3B3 1105 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 RANBP3LQ86VV4 465 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 CIR1Q86X95 450 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 VRK3Q8IV63 474 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 SERPINA12Q8IW75 414 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 SYNE4Q8N205 404 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 FTMTQ8N4E7 242 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 ZNF283Q8N7M2 679 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 PXT1Q8NFP0 134 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 PAQR8Q8TEZ7 354 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 MFSD3Q96ES6 412 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 CMTM7Q96FZ5 175 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 CDKN2AIPNLQ96HQ2 116 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 MS4A4EQ96PG1 132 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 SLC38A1Q9H2H9 487 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 MTIF3Q9H2K0 278 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 ACSS1Q9NUB1 689 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 CALML5Q9NZT1 146 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 NLKQ9UBE8 527 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 ACSL6Q9UKU0 697 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 RPH3ALQ9UNE2 315 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 C19orf53Q9UNZ5 99 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 PCDHB14Q9Y5E9 798 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 COL24A1Q17RW2 1714 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 NUP188Q5SRE5 1749 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 TNS3Q68CZ2 1445 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 KIAA1551Q9HCM1 1747 aa10.27□□□□□ -0.76
PDLIM5-210ENST00000508216 MAST2Q6P0Q8 1798 aa10.27□□□□□ -0.76
PDLIM5-210ENST00000508216 PRAMEF33A0A0G2JMD5 474 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 TMEM72A0PK05 275 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 HMSDA8MTL9 139 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 TP53I11O14683 189 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 ARPC5O15511 151 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 KCNAB3O43448 404 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 PRAMEF10O60809 474 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 PRAMEF2O60811 474 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 WBP4O75554 376 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 PRDM1O75626 825 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 RP2O75695 350 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 AKAP3O75969 853 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 F10P00742 488 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 MT-ND1P03886 318 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 MT-ND4LP03901 98 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 ABOP16442 354 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 AHCYP23526 432 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 SSTR2P30874 369 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 IRS1P35568 1242 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 CDKN2CP42773 168 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 IDH3GP51553 393 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 EGR3Q06889 387 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 DUSP8Q13202 625 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 KCNA10Q16322 511 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 SH3PXD2AQ5TCZ1 1133 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 PTCRAQ6ISU1 281 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 TMEM88Q6PEY1 159 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 ZNF720Q7Z2F6 126 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 LHFPL4Q7Z7J7 247 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 LRRC28Q86X40 367 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 CBLN2Q8IUK8 224 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 PQLC3Q8N755 202 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 NAXEQ8NCW5 288 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 OR2D3Q8NGH3 330 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 OR52E4Q8NGH9 312 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 SPPL2BQ8TCT7 592 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 TRAPPC12Q8WVT3 735 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 C3orf49Q96BT1 292 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 SENP5Q96HI0 755 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 OR14A2Q96R54 314 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 ADAM2Q99965 735 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 CPPED1Q9BRF8 314 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 AMNQ9BXJ7 453 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 ARHGAP39Q9C0H5 1083 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 TGIF2Q9GZN2 237 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 OR51J1Q9H342 316 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 HMX1Q9NP08 348 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 PDE7BQ9NP56 450 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 ADAP2Q9NPF8 381 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 FBXO7Q9Y3I1 522 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 PLEKHM1Q9Y4G2 1056 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 MTCL1Q9Y4B5 1905 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 SLIT2O94813 1529 aa10.27□□□□□ -0.77
PDLIM5-210ENST00000508216 XKRY2A2RUG3 117 aa10.26□□□□□ -0.77
PDLIM5-210ENST00000508216 CXorf65A6NEN9 183 aa10.26□□□□□ -0.77
PDLIM5-210ENST00000508216 DUXAA6NLW8 204 aa10.26□□□□□ -0.77
PDLIM5-210ENST00000508216 CXorf49A8MYA2 514 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-210ENST00000508216 SDHDO14521 159 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms