RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CMTM6Q9NX76 183 aa7.04□□□□□ -1.28
PDGFRA-206ENST00000508170 TAS2R9Q9NYW1 312 aa7.04□□□□□ -1.28
PDGFRA-206ENST00000508170 NLGN3Q9NZ94 848 aa7.04□□□□□ -1.28
PDGFRA-206ENST00000508170 CD274Q9NZQ7 290 aa7.04□□□□□ -1.28
PDGFRA-206ENST00000508170 LCMT1Q9UIC8 334 aa7.04□□□□□ -1.28
PDGFRA-206ENST00000508170 TMCO1Q9UM00 188 aa7.04□□□□□ -1.28
PDGFRA-206ENST00000508170 MRPS18BQ9Y676 258 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-206ENST00000508170 ADAMTSL3P82987 1691 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 FEZF1A0PJY2 475 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 SMCO3A2RU48 225 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 CPED1A4D0V7 1026 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 MIF4GDA9UHW6 222 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 B8ZZF3 427 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 CCSO14618 274 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 B4GALT5O43286 388 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 GOT2P00505 430 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 RAB40ALP0C0E4 278 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 ACADSP16219 412 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 TNNI1P19237 187 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 CD22P20273 847 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 UQCRC1P31930 480 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 TGFBR2P37173 567 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 P2RY4P51582 365 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 PPP2R2BQ00005 443 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 BST2Q10589 180 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 RPE65Q16518 533 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 ZNF568Q3ZCX4 644 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 C6orf226Q5I0X4 101 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 LYSMD4Q5XG99 296 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 TMEM225Q6GV28 225 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 SMIM15Q7Z3B0 74 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 RNF130Q86XS8 419 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 TRIM48Q8IWZ4 208 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 ALLCQ8N6M5 410 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 STXBP6Q8NFX7 210 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 NETO1Q8TDF5 533 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 SLC35F5Q8WV83 523 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 SIK2Q9H0K1 926 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 OR10A5Q9H207 317 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 PCMTD2Q9NV79 361 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 SMOXQ9NWM0 555 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 IFNKQ9P0W0 207 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 NYAP2Q9P242 653 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 PRG3Q9Y2Y8 225 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 RNF115Q9Y4L5 304 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 RPAP1Q9BWH6 1393 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 HEG1Q9ULI3 1381 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 MROH6A6NGR9 719 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 A6NNC1 897 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 KCNU1A8MYU2 1149 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 LEFTY2O00292 366 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 LAD1O00515 517 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 OR10H2O60403 315 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 MAGEC1O60732 1142 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 TRIM13O60858 407 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 GABRA5P31644 462 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 CASP14P31944 242 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 PPP3CCP48454 512 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 ART1P52961 327 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 MTCP1P56278 107 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 PRKCQQ04759 706 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 ADGRE1Q14246 886 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 TRAM2Q15035 370 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 BRMS1LQ5PSV4 323 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 OR52W1Q6IF63 320 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 UQCC3Q6UW78 93 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 QSOX2Q6ZRP7 698 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 PCDH20Q8N6Y1 951 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 OR5M8Q8NGP6 311 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 IFT81Q8WYA0 676 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 ECHDC3Q96DC8 303 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 FAM84BQ96KN1 310 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 ZNF251Q9BRH9 671 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 TPSD1Q9BZJ3 242 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 TBC1D17Q9HA65 648 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 Q9N2J8 555 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 MYNNQ9NPC7 610 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 ZNF446Q9NWS9 450 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 GAR1Q9NY12 217 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 PIPOXQ9P0Z9 390 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 ABCG2Q9UNQ0 655 aa7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.03□□□□□ -1.28
PDGFRA-206ENST00000508170 CPSF1Q10570 1443 aaKnown RBP7.02□□□□□ -1.28
PDGFRA-206ENST00000508170 EDC4Q6P2E9 1401 aaKnown RBP7.02□□□□□ -1.28
PDGFRA-206ENST00000508170 RIMS2Q9UQ26 1411 aa7.02□□□□□ -1.28
PDGFRA-206ENST00000508170 TCRBV5S2A0A599 114 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 TMEM82A0PJX8 343 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 ILVBLA1L0T0 632 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 EFCAB10A6NFE3 127 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 CBY3A6NI87 242 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 PRR33A8MZF0 331 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 SLC9A3R1O14745 358 aaPredicted RBP7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 SH3BGRLO75368 114 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 NXPH2O95156 264 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 PGK1P00558 417 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 AQP2P41181 271 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 ASPAP45381 313 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 SLC34A1Q06495 639 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 TMEM35AQ53FP2 167 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 CD276Q5ZPR3 534 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms