RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 PGM2L1Q6PCE3 622 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 BHLHB9Q6PI77 547 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 FAM198BQ6UWH4 519 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 OR52N2Q8NGI0 321 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 CT55Q8WUE5 264 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 CCDC124Q96CT7 223 aaKnown RBP16.33■□□□□ 0.2
RNF4-209ENST00000507784 NEURL3Q96EH8 262 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 YIPF4Q9BSR8 244 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 SLC26A1Q9H2B4 701 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 ALG2Q9H553 416 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 EPS8L2Q9H6S3 715 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 MAT2BQ9NZL9 334 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 PTGFRNQ9P2B2 879 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 NXT1Q9UKK6 140 aaKnown RBP16.33■□□□□ 0.2
RNF4-209ENST00000507784 PTRH2Q9Y3E5 179 aaKnown RBP16.33■□□□□ 0.2
RNF4-209ENST00000507784 CLDN16Q9Y5I7 305 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 RIF1Q5UIP0 2472 aaKnown RBP16.33■□□□□ 0.2
RNF4-209ENST00000507784 IGKV3D-11A0A0A0MRZ8 115 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 TCRBV16S1A1N1A0A5B0 115 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 PRORSD1PA6NEY8 169 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 C17orf105B2RV13 164 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 PLOD2O00469 737 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 GSTA4O15217 222 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 DYRK3O43781 588 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 SLITRK5O94991 958 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 TCN2P20062 427 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 MATN1P21941 496 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 EFNA3P52797 238 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 RPS26P62854 115 aaKnown RBP16.32■□□□□ 0.2
RNF4-209ENST00000507784 MAP4K2Q12851 820 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 EXOSC7Q15024 291 aaKnown RBP16.32■□□□□ 0.2
RNF4-209ENST00000507784 NCF4Q15080 339 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 RGNQ15493 299 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 CYP51A1Q16850 503 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 COX20Q5RI15 118 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 CPZQ66K79 652 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 LANCL3Q6ZV70 420 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 ESX1Q8N693 406 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 ENDOVQ8N8Q3 282 aaKnown RBP16.32■□□□□ 0.2
RNF4-209ENST00000507784 ZNF675Q8TD23 568 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 SLC46A1Q96NT5 459 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 SPSB2Q99619 263 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 CNPPD1Q9BV87 410 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 SPRY4Q9C004 299 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 KAT8Q9H7Z6 458 aaKnown RBP16.32■□□□□ 0.2
RNF4-209ENST00000507784 WDR54Q9H977 334 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 CXorf21Q9HAI6 301 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 ADAP2Q9NPF8 381 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 EQTNQ9NQ60 294 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 CD300AQ9UGN4 299 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 USP22Q9UPT9 525 aa16.32■□□□□ 0.2
RNF4-209ENST00000507784 RRP15Q9Y3B9 282 aaKnown RBP16.32■□□□□ 0.2
RNF4-209ENST00000507784 ZNF292O60281 2723 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 H0YHG0 523 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 UPK1AO00322 258 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 BRINP1O60477 761 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 RAD1O60671 282 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 STAMBPO95630 424 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 CD63P08962 238 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 ETFAP13804 333 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 GPX2P18283 190 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 GALNSP34059 522 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 FOLR3P41439 243 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 PRIM2P49643 509 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 DMTNQ08495 405 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 MGAT2Q10469 447 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 TNFAIP8L2Q6P589 184 aaPredicted RBP16.31■□□□□ 0.2
RNF4-209ENST00000507784 NLGN4XQ8N0W4 816 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 VWA5B2Q8N398 1253 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 NLGN4YQ8NFZ3 816 aaPredicted RBP16.31■□□□□ 0.2
RNF4-209ENST00000507784 OR2T12Q8NG77 320 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 OR52R1Q8NGF1 315 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 JADE3Q92613 823 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 C16orf58Q96GQ5 468 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 ZNF583Q96ND8 569 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 B3GNT4Q9C0J1 378 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 OR51I1Q9H343 314 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 WDR70Q9NW82 654 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 SLC7A8Q9UHI5 535 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 FAF1Q9UNN5 650 aaPredicted RBP16.31■□□□□ 0.2
RNF4-209ENST00000507784 ERVK-19Q9WJR5 959 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 CLCA3PQ9Y6N3 262 aa16.31■□□□□ 0.2
RNF4-209ENST00000507784 SDK2Q58EX2 2172 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 A0A087WV62 115 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 SYNDIG1LA6NDD5 238 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 FAM220BPB1ANY3 271 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 PLOD3O60568 738 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 DNAJA2O60884 412 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 NME6O75414 186 aaPredicted RBP16.3■□□□□ 0.2
RNF4-209ENST00000507784 GMNNO75496 209 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 HMGN2P05204 90 aaKnown RBP16.3■□□□□ 0.2
RNF4-209ENST00000507784 HSD17B1P14061 328 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 ANXA11P50995 505 aaKnown RBP16.3■□□□□ 0.2
RNF4-209ENST00000507784 DSTNP60981 165 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 RPS15P62841 145 aaKnown RBP16.3■□□□□ 0.2
RNF4-209ENST00000507784 VAC14Q08AM6 782 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 FOXC1Q12948 553 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 MAP7Q14244 749 aa16.3■□□□□ 0.2
RNF4-209ENST00000507784 LASP1Q14847 261 aaKnown RBP16.3■□□□□ 0.2
RNF4-209ENST00000507784 ELAVL1Q15717 326 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms