RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 DNAJB8Q8NHS0 232 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 BCAS4Q8TDM0 211 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 CTHRC1Q96CG8 243 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 SPDL1Q96EA4 605 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 ELP4Q96EB1 424 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 ITCHQ96J02 903 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 TEX37Q96LM6 180 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 ZNF354BQ96LW1 612 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 OR10A5Q9H207 317 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 SAR1AQ9NR31 198 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 CCDC88CQ9P219 2028 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 TRBV11-1A0A0K0K1C0 115 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 MKRN2OSH3BPM6 223 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 EMC8O43402 210 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 IL12AP29459 219 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 DCAF7P61962 342 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 RCAN2Q14206 197 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 AGAP7PQ5VUJ5 663 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 TMEM64Q6YI46 380 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 ZNF551Q7Z340 670 aaPredicted RBP18.69■□□□□ 0.58
USP53-203ENST00000507597 OR4A15Q8NGL6 344 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 ZNF721Q8TF20 911 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 AGAP4Q96P64 663 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 PANX1Q96RD7 426 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 SLC25A23Q9BV35 468 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 ZNF385DQ9H6B1 395 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 ZNF639Q9UID6 485 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 PCDHGB7Q9Y5F8 929 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 SNX8Q9Y5X2 465 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 SCN2AQ99250 2005 aa18.69■□□□□ 0.58
USP53-203ENST00000507597 NR5A2O00482 541 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 FCHO1O14526 889 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 RFXANKO14593 260 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 ANGPT2O15123 496 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 ANP32DO95626 131 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 CPSF4O95639 269 aaKnown RBP18.68■□□□□ 0.58
USP53-203ENST00000507597 C6orf47O95873 294 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 IGKV3-11P04433 115 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 SNRPB2P08579 225 aaKnown RBP18.68■□□□□ 0.58
USP53-203ENST00000507597 KRT16P08779 473 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 TRPC1P48995 793 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 GPR143P51810 404 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 CHAF1BQ13112 559 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 STX5Q13190 355 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 MYBPC3Q14896 1274 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 ZNHIT3Q15649 155 aaPredicted RBP18.68■□□□□ 0.58
USP53-203ENST00000507597 MPEG1Q2M385 716 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 CRB2Q5IJ48 1285 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 ZCCHC12Q6PEW1 402 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 FAM111BQ6SJ93 734 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 TMEM107Q6UX40 140 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 MTDHQ86UE4 582 aaKnown RBP18.68■□□□□ 0.58
USP53-203ENST00000507597 LGI4Q8N135 537 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 APCDD1LQ8NCL9 501 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 OR56A1Q8NGH5 318 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 OR9I1Q8NGQ6 314 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 PSMA8Q8TAA3 256 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 NUBPLQ8TB37 319 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 SFXN5Q8TD22 340 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 TM9SF4Q92544 642 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 KAT2AQ92830 837 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 CCDC115Q96NT0 180 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 LRRC37BQ96QE4 947 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 PRORYQ9H606 182 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 GPR83Q9NYM4 423 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 LEF1Q9UJU2 399 aaPredicted RBP18.68■□□□□ 0.58
USP53-203ENST00000507597 VPS4AQ9UN37 437 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 C19orf53Q9UNZ5 99 aaPredicted RBP18.68■□□□□ 0.58
USP53-203ENST00000507597 NDUFAF1Q9Y375 327 aa18.68■□□□□ 0.58
USP53-203ENST00000507597 C2orf92A0A1B0GVN3 265 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 A0A1W2PP18 115 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 A0A1W2PS29 197 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 A8MUI8 341 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 SFTPCP11686 197 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 CCT3P49368 545 aaKnown RBP18.67■□□□□ 0.58
USP53-203ENST00000507597 PRIM2P49643 509 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 DGKQP52824 942 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 WNT3P56703 355 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 SLC37A1P57057 533 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 DUSP2Q05923 314 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 KLF10Q13118 480 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 TP53BP2Q13625 1128 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 LTB4RQ15722 352 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 TBR1Q16650 682 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 MEP1AQ16819 746 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 PRSS53Q2L4Q9 553 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 MMEL1Q495T6 779 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 VPS26BQ4G0F5 336 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 TIGD2Q4W5G0 525 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 TRMT12Q53H54 448 aaKnown RBP18.67■□□□□ 0.58
USP53-203ENST00000507597 ABHD17BQ5VST6 288 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 DGAT2L6Q6ZPD8 337 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 SZRD1Q7Z422 152 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 HPS6Q86YV9 775 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 NUP43Q8NFH3 380 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 OR52R1Q8NGF1 315 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 MAGED4Q96JG8 741 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 NUDT9Q9BW91 350 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 NMUR2Q9GZQ4 415 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 EPS8L2Q9H6S3 715 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms