RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 DCAF7P61962 342 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 RASA2Q15283 850 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 SLC25A35Q3KQZ1 300 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 C1orf185Q5T7R7 199 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 RIPPLY2Q5TAB7 128 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 SLC48A1Q6P1K1 146 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 DGAT2L6Q6ZPD8 337 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 NCCRP1Q6ZVX7 275 aaPredicted RBP13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 PACS2Q86VP3 889 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 SLC22A9Q8IVM8 553 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 PM20D2Q8IYS1 436 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 GBP7Q8N8V2 638 aaPredicted RBP13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 OR10G3Q8NGC4 313 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 OR10Q1Q8NGQ4 319 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 KIF18AQ8NI77 898 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 ACMSDQ8TDX5 336 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 DIO2Q92813 273 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 ERP27Q96DN0 273 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 ZNF358Q9NW07 568 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 TEX10Q9NXF1 929 aaPredicted RBP13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 PRODH2Q9UF12 536 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 KCNN3Q9UGI6 736 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 CNOT11Q9UKZ1 510 aaKnown RBP13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 SLC12A4Q9UP95 1085 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 HRH3Q9Y5N1 445 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 A8MT66 165 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 AHRRA9YTQ3 701 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 HRKO00198 91 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 PGRMC2O15173 223 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 ACOX3O15254 700 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 PRKRAO75569 313 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 TOXO94900 526 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 ATP1B1P05026 303 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 GSTA1P08263 222 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 MSX1P28360 303 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 TLE4Q04727 773 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 CLCQ05315 142 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 MAP4K2Q12851 820 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 CSTF3Q12996 717 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 PRAMEF20Q5VT98 475 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 CES4AQ5XG92 561 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 CRYBG3Q68DQ2 2970 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 TMEM81Q6P7N7 255 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 ADGRD1Q6QNK2 874 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 COMMD6Q7Z4G1 85 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 HOMEZQ8IX15 550 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 VWA5B2Q8N398 1253 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 ZNF615Q8N8J6 731 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 NOA1Q8NC60 698 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 OR5M9Q8NGP3 310 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 NEIL3Q8TAT5 605 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 SPPL2AQ8TCT8 520 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 CCDC126Q96EE4 140 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 HSPBAP1Q96EW2 488 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 MRPL1Q9BYD6 325 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 VPS29Q9UBQ0 182 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 LIPGQ9Y5X9 500 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 ZNF780BQ9Y6R6 833 aa13.26□□□□□ -0.29
HMGCS1-203ENST00000507004 FAM90A27PA6NNH2 459 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 HSPB2A8KAH6 182 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 TRIM3O75382 744 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 SUPT7LO94864 414 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 GBAP04062 536 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 CLPSP04118 112 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 GLI4P10075 376 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 DRD2P14416 443 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 ATP5F1P24539 256 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 ECHS1P30084 290 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 SSTR4P31391 388 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 MASP1P48740 699 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 SNTA1Q13424 505 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 HSPB2Q16082 182 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 NUP54Q7Z3B4 507 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 DMRTC2Q8IXT2 367 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 SREK1Q8WXA9 508 aaKnown RBP13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 ADIPOR1Q96A54 375 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 TMEM41AQ96HV5 264 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 NSUN5Q96P11 429 aaKnown RBP13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 ZNF382Q96SR6 550 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 ANGPTL4Q9BY76 406 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 MCM8Q9UJA3 840 aa13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 INTS1Q8N201 2190 aaKnown RBP13.25□□□□□ -0.29
HMGCS1-203ENST00000507004 EML6Q6ZMW3 1958 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 LRRC3CA6NJW4 275 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 ABCB7O75027 752 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 ULK1O75385 1050 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 PDYNP01213 254 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 ENO1P06733 434 aaKnown RBP13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 RHOXF2BP0C7M4 288 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 IMPDH1P20839 514 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 GDF1P27539 372 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 HMOX2P30519 316 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 HSD17B3P37058 310 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 CDH13P55290 713 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 PKNOX1P55347 436 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 TFF3Q07654 80 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 GALNT1Q10472 559 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 HEPACAMQ14CZ8 416 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 PRICKLE4Q2TBC4 344 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 SPIN4Q56A73 249 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms