RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 HKDC1Q2TB90 917 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 FAM219BQ5XKK7 198 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 ASRGL1Q7L266 308 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 BNIPLQ7Z465 357 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 LINC00612Q8N6U2 182 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 TMEM185AQ8NFB2 350 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 BEST4Q8NFU0 473 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 RHOXF1Q8NHV9 184 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 FLVCR1-AS1Q8TAF5 88 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 RDH11Q8TC12 318 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 MGARPQ8TDB4 240 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 RBM18Q96H35 190 aaKnown RBP3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 ATP6V0BQ99437 205 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 TTYH2Q9BSA4 534 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 ST6GALNAC5Q9BVH7 336 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 CARD9Q9H257 536 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 NRN1Q9NPD7 142 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 SLC7A10Q9NS82 523 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 ABCC13Q9NSE7 274 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 FETUBQ9UGM5 382 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 MLXQ9UH92 298 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 RNF24Q9Y225 148 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 ENTPD4Q9Y227 616 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 KLHDC2Q9Y2U9 406 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 ATG4BQ9Y4P1 393 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 FAM205AQ6ZU69 1335 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 TRAV9-2A0A087WT02 112 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 A0A0A6YYD4 124 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 A0A1B0GVY2 172 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 ZNF487B1APH4 448 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 PHOX2AO14813 284 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 LRP3O75074 770 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 ZNF253O75346 499 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 KBTBD11O94819 623 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 PIGRP01833 764 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 APRTP07741 180 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 UCP1P25874 307 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 MARCKSP29966 332 aaPredicted RBP3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 SLC7A2P52569 658 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 IST1P53990 364 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 HMGCS2P54868 508 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 RAG2P55895 527 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 YBEYP58557 167 aaPredicted RBP3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 SRP54P61011 504 aaKnown RBP3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 PEX6Q13608 980 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 LTB4RQ15722 352 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 CNPY1Q3B7I2 92 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 KRT71Q3SY84 523 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 SLC22A6Q4U2R8 563 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 C14orf28Q4W4Y0 310 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 ETFRF1Q6IPR1 90 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 APOOLQ6UXV4 268 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 DLEU7Q6UYE1 221 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 MOB2Q70IA6 237 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 ADAMTSL2Q86TH1 951 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 LUZP1Q86V48 1076 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 SLC22A16Q86VW1 577 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 SPAG16Q8N0X2 631 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 CCNYQ8ND76 341 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 EXOC6Q8TAG9 804 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 ZNF671Q8TAW3 534 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 URGCPQ8TCY9 931 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 ACCSQ96QU6 501 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 MCCC1Q96RQ3 725 aaPredicted RBP3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 APOL2Q9BQE5 337 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 DDX47Q9H0S4 455 aaKnown RBP3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 TNMDQ9H2S6 317 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 HPS4Q9NQG7 708 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 CUTCQ9NTM9 273 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 ZNF107Q9UII5 783 aaPredicted RBP3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 STRAPQ9Y3F4 350 aaKnown RBP3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 POGZQ7Z3K3 1410 aa3.1□□□□□ -1.91
TOPBP1-204ENST00000505804 SYNJ2O15056 1496 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 TRBV2A0A0J9YWF9 115 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 SYNGR4O95473 234 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 MAT2AP31153 395 aaKnown RBP3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 NPY2RP49146 381 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 RPL34P49207 117 aaKnown RBP3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 NT5C2P49902 561 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 MFAP2P55001 183 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 TRA2BP62995 288 aaKnown RBP3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 CARTPTQ16568 116 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 HAGHQ16775 308 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 ACER2Q5QJU3 275 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 RNLSQ5VYX0 342 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 ZNF600Q6ZNG1 722 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 Q6ZR54 194 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 RABEPKQ7Z6M1 372 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 SLC22A18ASQ8N1D0 253 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 TBCKQ8TEA7 893 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 TMEM37Q8WXS4 190 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 BIRC7Q96CA5 298 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 DEFB118Q96PH6 123 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 NLNQ9BYT8 704 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 ZBP1Q9H171 429 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 THAP9Q9H5L6 903 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 TRIM10Q9UDY6 481 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 EMCNQ9ULC0 261 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 SLC9A8Q9Y2E8 581 aa3.09□□□□□ -1.91
TOPBP1-204ENST00000505804 ABCA7Q8IZY2 2146 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms