RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 DIO2Q92813 273 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 PPWD1Q96BP3 646 aaKnown RBP8.3□□□□□ -1.08
DHFR-202ENST00000504396 LRRC39Q96DD0 335 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 RBM18Q96H35 190 aaKnown RBP8.3□□□□□ -1.08
DHFR-202ENST00000504396 MS4A14Q96JA4 679 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 ART5Q96L15 291 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 MAPKAP1Q9BPZ7 522 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 EFCAB11Q9BUY7 163 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 CNOT10Q9H9A5 744 aaKnown RBP8.3□□□□□ -1.08
DHFR-202ENST00000504396 POPDC3Q9HBV1 291 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 BEX4Q9NWD9 120 aaPredicted RBP8.3□□□□□ -1.08
DHFR-202ENST00000504396 CNIH4Q9P003 139 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 ASIC3Q9UHC3 531 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 SLC6A5Q9Y345 797 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 GOLGA6L10A0A0M3HER8 536 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 FAM95CA0A1B0GW59 222 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 KIAA1324LA8MWY0 1029 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 H7C1Q1 480 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 PGRMC1O00264 195 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 SAP18O00422 153 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 CASKO14936 926 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 FGF17O60258 216 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 OR10H2O60403 315 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 SMPD2O60906 423 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 LY6G6DO95868 133 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 CEACAM8P31997 349 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 OPRM1P35372 400 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 TIMP3P35625 211 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 STT3AP46977 705 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 HERVK_113P63132 956 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 ERVK-8P63133 956 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 SORDQ00796 357 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 CRYZQ08257 329 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 LAPTM5Q13571 262 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 RCAN2Q14206 197 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 HIST2H2ACQ16777 129 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 AP5B1Q2VPB7 878 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 PAGE2BQ5JRK9 111 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 HIST2H2AA3Q6FI13 130 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 RNF111Q6ZNA4 994 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 BEND4Q6ZU67 534 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 LUZP2Q86TE4 346 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 EXT2Q93063 718 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 RHBDF1Q96CC6 855 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 WDR34Q96EX3 536 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 PTCD3Q96EY7 689 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 SENP5Q96HI0 755 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 VPS39Q96JC1 886 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 TIMP4Q99727 224 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 TBCDQ9BTW9 1192 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 RBM24Q9BX46 236 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 ERVK-6Q9BXR3 956 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 PLEKHF2Q9H8W4 249 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 SH2D2AQ9NP31 389 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 DNAJC11Q9NVH1 559 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 PSD3Q9NYI0 1048 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 CHMP2BQ9UQN3 213 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 ERVK-19Q9WJR5 959 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 EIF3LQ9Y262 564 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 CHCHD2Q9Y6H1 151 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 IKBKGQ9Y6K9 419 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 SH3D21A4FU49 640 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 HRKO00198 91 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 DNALI1O14645 258 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 TP53I11O14683 189 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 GSC2O15499 205 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 CCNT2O60583 730 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 SCELO95171 688 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 ACSL3O95573 720 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 S100BP04271 92 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 TMIGD3P0DMS9 266 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 CD53P19397 219 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 ATP5A1P25705 553 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 CTSSP25774 331 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 SERPINB1P30740 379 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 GCKP35557 465 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 GGT5P36269 586 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 CPOXP36551 454 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 HSPA7P48741 367 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 RAP1GDS1P52306 607 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 SLC12A2P55011 1212 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 IGLV3-21P80748 117 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 IRF8Q02556 426 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 DDX39BQ13838 428 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 DOC2AQ14183 400 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 ZNF267Q14586 743 aaPredicted RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 PDK4Q16654 411 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 TMEM35AQ53FP2 167 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 EXOSC6Q5RKV6 272 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 HLA-DQA1Q5Y7H0 255 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 NSUN5P2Q63ZY6 315 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 STEAP4Q687X5 459 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 BICRALQ6AI39 1079 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 TRMT10BQ6PF06 316 aaKnown RBP8.29□□□□□ -1.08
DHFR-202ENST00000504396 TMEM64Q6YI46 380 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 ZNF793Q6ZN11 406 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 PRIMA1Q86XR5 153 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 TAGAPQ8N103 731 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 PDIK1LQ8N165 341 aa8.29□□□□□ -1.08
DHFR-202ENST00000504396 ACOT4Q8N9L9 421 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms