RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 ITIH5Q86UX2 942 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 DND1Q8IYX4 353 aaKnown RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 PARP8Q8N3A8 854 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 MARVELD2Q8N4S9 558 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 CD101Q93033 1021 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 HIST1H2ACQ93077 130 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 ZNF274Q96GC6 653 aaPredicted RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 COG3Q96JB2 828 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 C2orf48Q96LS8 159 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 IWS1Q96ST2 819 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 IL12RB2Q99665 862 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 ZPBPQ9BS86 351 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 MRPL13Q9BYD1 178 aaKnown RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 TMEM117Q9H0C3 514 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 RMND5AQ9H871 391 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 PANK3Q9H999 370 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 ZFP57Q9NU63 452 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 GTSE1Q9NYZ3 720 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 LHX3Q9UBR4 397 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 SUN2Q9UH99 717 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 FOXJ3Q9UPW0 622 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 WDR37Q9Y2I8 494 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 KLHDC2Q9Y2U9 406 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 RNF115Q9Y4L5 304 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 A0A1W2PP64 1363 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 ANKRD36BQ8N2N9 1353 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 AKAP12Q02952 1782 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 EDC4Q6P2E9 1401 aaKnown RBP4.21□□□□□ -1.73
SCLT1-206ENST00000503565 TRPM3Q9HCF6 1732 aaPredicted RBP4.21□□□□□ -1.73
SCLT1-206ENST00000503565 YJEFN3A6XGL0 299 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 ANKRD30BLA7E2S9 258 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 LGALS8O00214 317 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 SMAD6O43541 496 aaKnown RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 GMFGO60234 142 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 VTNP04004 478 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 CA3P07451 260 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 FAM157CP0CG43 387 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 PAX1P15863 534 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 RPL35AP18077 110 aaKnown RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 ITGA3P26006 1051 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 PPP2R1AP30153 589 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 SOX3P41225 446 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 NPY2RP49146 381 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 NANOS2P60321 138 aaKnown RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 CSNK2BP67870 215 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 BTG3Q14201 252 aaPredicted RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 CLPPQ16740 277 aaPredicted RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 ANKRD55Q3KP44 614 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 SPANXN4Q5MJ08 99 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 ATP1A1-AS1Q5TC04 95 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 C16orf87Q6PH81 154 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 CCDC73Q6ZRK6 1079 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 C9orf139Q6ZV77 190 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 TRPT1Q86TN4 253 aaKnown RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 C17orf64Q86WR6 236 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 CENPLQ8N0S6 344 aaPredicted RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 ELMOD1Q8N336 334 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 MAB21L3Q8N8X9 362 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 COLGALT1Q8NBJ5 622 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 RELL2Q8NC24 303 aaPredicted RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 MNS1Q8NEH6 495 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 TRIM58Q8NG06 486 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 OR10T2Q8NGX3 314 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 LMO3Q8TAP4 145 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 GATAD1Q8WUU5 269 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 NUDCD2Q8WVJ2 157 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 DYRK2Q92630 601 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 THOC3Q96J01 351 aaKnown RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 FAM218AQ96MZ4 157 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 GPA33Q99795 319 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 ZSCAN5AQ9BUG6 496 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 C6orf106Q9H6K1 298 aaPredicted RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 GORASP2Q9H8Y8 452 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 CALHM2Q9HA72 323 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 S100A14Q9HCY8 104 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 RRAGDQ9NQL2 400 aaPredicted RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 MAN2C1Q9NTJ4 1040 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 ERVK-18Q9QC07 812 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 MIOXQ9UGB7 285 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 CCDC7Q96M83 1385 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 CD163L1Q9NR16 1453 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 ALS2Q96Q42 1657 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 MARF1Q9Y4F3 1742 aaKnown RBP4.21□□□□□ -1.74
SCLT1-206ENST00000503565 NSD3Q9BZ95 1437 aa4.21□□□□□ -1.74
SCLT1-206ENST00000503565 MYOM1P52179 1685 aa4.2□□□□□ -1.74
SCLT1-206ENST00000503565 BCL9LQ86UU0 1499 aa4.2□□□□□ -1.74
SCLT1-206ENST00000503565 RNF222A6NCQ9 220 aa4.2□□□□□ -1.74
SCLT1-206ENST00000503565 ZSCAN5CA6NGD5 496 aaPredicted RBP4.2□□□□□ -1.74
SCLT1-206ENST00000503565 KLF11O14901 512 aa4.2□□□□□ -1.74
SCLT1-206ENST00000503565 XPO1O14980 1071 aaKnown RBP4.2□□□□□ -1.74
SCLT1-206ENST00000503565 SIGLEC5O15389 551 aa4.2□□□□□ -1.74
SCLT1-206ENST00000503565 KCNAB3O43448 404 aa4.2□□□□□ -1.74
SCLT1-206ENST00000503565 IDH1O75874 414 aaKnown RBP4.2□□□□□ -1.74
SCLT1-206ENST00000503565 SNX4O95219 450 aa4.2□□□□□ -1.74
SCLT1-206ENST00000503565 PAK4O96013 591 aaPredicted RBP4.2□□□□□ -1.74
SCLT1-206ENST00000503565 HPRP00739 348 aa4.2□□□□□ -1.74
SCLT1-206ENST00000503565 EDN1P05305 212 aa4.2□□□□□ -1.74
SCLT1-206ENST00000503565 CLUP10909 449 aa4.2□□□□□ -1.74
SCLT1-206ENST00000503565 AADACP22760 399 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms