RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 P2RY11Q96G91 374 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 MSANTD3Q96H12 275 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 SENP5Q96HI0 755 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 CXorf58Q96LI9 332 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 TSSK2Q96PF2 358 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 VPS35Q96QK1 796 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 FCRL5Q96RD9 977 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 SIGLEC11Q96RL6 698 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 DUSP26Q9BV47 211 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 C1QTNF3Q9BXJ4 246 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRIM9Q9C026 710 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 BLZF1Q9H2G9 400 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 FOXP1Q9H334 677 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 TMEM185BQ9H7F4 350 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 ELOVL3Q9HB03 270 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 SGK2Q9HBY8 427 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 PDGFCQ9NRA1 345 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 GSN-AS1Q9NRJ2 163 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 PKD2L2Q9NZM6 624 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 RCC2Q9P258 522 aaKnown RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLC17A6Q9P2U8 582 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 B3GAT1Q9P2W7 334 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 ERRFI1Q9UJM3 462 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 CDH9Q9ULB4 789 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 LRP12Q9Y561 859 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 FOCADQ5VW36 1801 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 PHIPQ8WWQ0 1821 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF532Q9HCE3 1301 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 MAST2Q6P0Q8 1798 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 MYO5AQ9Y4I1 1855 aaKnown RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRAV6A0A075B6T7 132 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 HYKKA2RU49 373 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 MANSC4A6NHS7 340 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 OR6C75A6NL08 312 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 GABRR3A8MPY1 467 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 C12orf71A8MTZ7 269 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 POC1B-GALNT4F8VUJ3 575 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 M0R296 226 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 MATN3O15232 486 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 PFKFB2O60825 505 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 BAG4O95429 457 aaKnown RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 WNT1P04628 370 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 CHRM5P08912 532 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 TROVE2P10155 538 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 HAPLN1P10915 354 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 CYP2B6P20813 491 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 SYT1P21579 422 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 DGKAP23743 735 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 AXLP30530 894 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 HOXA7P31268 230 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLC6A8P48029 635 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 NUMBP49757 651 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 RGS19P49795 217 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 BCAP31P51572 246 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 THOP1P52888 689 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 BDH1Q02338 343 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 CACNG1Q06432 222 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 FAM27E3Q08E93 113 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 HYAL1Q12794 435 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 MYBPHQ13203 477 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 NFATC2Q13469 925 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 LAMB3Q13751 1172 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 ELAVL3Q14576 367 aaKnown RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 CHRNA6Q15825 494 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 AANATQ16613 207 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 TATDN3Q17R31 274 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 HKDC1Q2TB90 917 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 SBK1Q52WX2 424 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF311Q5JNZ3 666 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 WLSQ5T9L3 541 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRIM65Q6PJ69 517 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 SCARA5Q6ZMJ2 495 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 CDHR3Q6ZTQ4 885 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 EIF3MQ7L2H7 374 aaKnown RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF367Q7RTV3 350 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 ADGRG3Q86Y34 549 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 CBWD2Q8IUF1 395 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 LRRC49Q8IUZ0 686 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 TMEM123Q8N131 208 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 GPR137CQ8N3F9 429 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 RYBPQ8N488 228 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLC5A8Q8N695 610 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 GCSAMQ8N6F7 178 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 C7orf57Q8NEG2 295 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRPV3Q8NET8 790 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 CLHC1Q8NHS4 586 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF398Q8TD17 642 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 LKAAEAR1Q8TD35 194 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 CCDC12Q8WUD4 166 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 LINC00476Q8WZB0 136 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 RND1Q92730 232 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 RAB39BQ96DA2 213 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 LGALS12Q96DT0 336 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 FAM71F1Q96KD3 344 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 C7orf34Q96L11 122 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 MSTO1Q9BUK6 570 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 UPF3BQ9BZI7 483 aaKnown RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 NAT10Q9H0A0 1025 aaKnown RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 RIMS4Q9H426 269 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms