RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 PDP1Q9P0J1 537 aaPredicted RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 SPATA7Q9P0W8 599 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 CPSF2Q9P2I0 782 aaKnown RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 ZNF624Q9P2J8 865 aaPredicted RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 SLC17A7Q9P2U7 560 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 XPR1Q9UBH6 696 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 ADAMTS6Q9UKP5 1117 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 IKZF3Q9UKT9 509 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 EMCNQ9ULC0 261 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 PDE10AQ9Y233 779 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 TDRKHQ9Y2W6 561 aaKnown RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 TESMINQ9Y4I5 508 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 OARD1Q9Y530 152 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 DNAH10Q8IVF4 4471 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 NCF1BA6NI72 391 aaPredicted RBP4.76□□□□□ -1.65
FXN-205ENST00000498653 GABRR3A8MPY1 467 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 NCF1CA8MVU1 366 aaPredicted RBP4.76□□□□□ -1.65
FXN-205ENST00000498653 H3BMH7 237 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 H3BS24 57 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 OVOL3O00110 214 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 UBXN8O00124 270 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 MYO1CO00159 1063 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 DLX3O60479 287 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 CDC40O60508 579 aaKnown RBP eCLIP4.76□□□□□ -1.65
FXN-205ENST00000498653 BMP10O95393 424 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 GUCA1CO95843 209 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 SERPINA7P05543 415 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 CD63P08962 238 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 ITGAMP11215 1152 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 NEFHP12036 1026 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 GFAPP14136 432 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 NCF1P14598 390 aaPredicted RBP4.76□□□□□ -1.65
FXN-205ENST00000498653 ITGAXP20702 1163 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 ATP5F1P24539 256 aaPredicted RBP4.76□□□□□ -1.65
FXN-205ENST00000498653 SHMT2P34897 504 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 HSD17B2P37059 387 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 KCNC1P48547 511 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 SLC18A1P54219 525 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 PRKAA2P54646 552 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 ALDH18A1P54886 795 aaKnown RBP4.76□□□□□ -1.65
FXN-205ENST00000498653 FOXL1Q12952 345 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 IKZF1Q13422 519 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 TUBA3CQ13748 450 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 GPR18Q14330 331 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 ARHGAP19Q14CB8 494 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 TGFBIQ15582 683 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 PHKG1Q16816 387 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 PPP1R3AQ16821 1122 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 CCSMST1Q4G0I0 132 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 GXYLT1Q4G148 440 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.76□□□□□ -1.65
FXN-205ENST00000498653 SULT1C3Q6IMI6 304 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 ARHGAP11AQ6P4F7 1023 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 TUBA3EQ6PEY2 450 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 SBSNQ6UWP8 590 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 ZYG11AQ6WRX3 759 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 SEM1Q6ZVN7 128 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 TAX1BP1Q86VP1 789 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 NUDCD3Q8IVD9 361 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 SLC22A9Q8IVM8 553 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 TCAIMQ8N3R3 496 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 Q8N3U1 123 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 PTGR2Q8N8N7 351 aaPredicted RBP4.76□□□□□ -1.65
FXN-205ENST00000498653 PDPRQ8NCN5 879 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 OR5M9Q8NGP3 310 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 FAM76AQ8TAV0 307 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 MGARPQ8TDB4 240 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 DENND1AQ8TEH3 1009 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 LCN9Q8WX39 176 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 DLG3Q92796 817 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 UBE2FQ969M7 185 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 FBXL8Q96CD0 374 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 CCDC126Q96EE4 140 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 LRRC46Q96FV0 321 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 MARK4Q96L34 752 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 PPM1MQ96MI6 270 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 PKP4Q99569 1192 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 NPAS2Q99743 824 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 PAIP2Q9BPZ3 127 aaKnown RBP4.76□□□□□ -1.65
FXN-205ENST00000498653 SRMSQ9H3Y6 488 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 KIR3DX1Q9H7L2 352 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 WWOXQ9NZC7 414 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 CIDEBQ9UHD4 219 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 PLAGL1Q9UM63 463 aa4.76□□□□□ -1.65
FXN-205ENST00000498653 ALMS1Q8TCU4 4167 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 WDR91A4D1P6 747 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 OR6C74A6NCV1 312 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 A8MT66 165 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 TARM1B6A8C7 271 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 G3V2L1 256 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 STX16-NPEPL1H3BU86 382 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 STX16O14662 325 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 BIRC5O15392 142 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 CCNT2O60583 730 aaKnown RBP4.75□□□□□ -1.65
FXN-205ENST00000498653 TRIM13O60858 407 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 NDUFS7O75251 213 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 H2AFYO75367 372 aaKnown RBP4.75□□□□□ -1.65
FXN-205ENST00000498653 ZBTB11O95625 1053 aaPredicted RBP4.75□□□□□ -1.65
FXN-205ENST00000498653 SLC16A8O95907 504 aa4.75□□□□□ -1.65
FXN-205ENST00000498653 BPGMP07738 259 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms