RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 TAGAPQ8N103 731 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 GPC2Q8N158 579 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 CPSF7Q8N684 471 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 POC5Q8NA72 575 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 TFB1MQ8WVM0 346 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 HTR3CQ8WXA8 447 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 IRGQQ8WZA9 623 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 ZNF560Q96MR9 790 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 CSPG4P5Q96PW8 444 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 CYP2S1Q96SQ9 504 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 KCNK16Q96T55 309 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 SERPINI1Q99574 410 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 PAIP2Q9BPZ3 127 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 SNRNP25Q9BV90 132 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 CALN1Q9BXU9 219 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 MRPL1Q9BYD6 325 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 MMP27Q9H306 513 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 GHITMQ9H3K2 345 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 KCNK15Q9H427 330 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 SUDS3Q9H7L9 328 aaPredicted RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 ZWILCHQ9H900 591 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 LRRC40Q9H9A6 602 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 C8orf4Q9NR00 106 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 DNAJC17Q9NVM6 304 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 UTP6Q9NYH9 597 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 C6orf203Q9P0P8 240 aaPredicted RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 SLC17A7Q9P2U7 560 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 SLC7A8Q9UHI5 535 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 TSPAN16Q9UKR8 245 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 UBQLN1Q9UMX0 589 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 CHMP2BQ9UQN3 213 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 TMEM5Q9Y2B1 443 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 MYO18AQ92614 2054 aaKnown RBP4.37□□□□□ -1.71
SSR3-209ENST00000498205 MGAMO43451 1857 aa4.37□□□□□ -1.71
SSR3-209ENST00000498205 OTOFQ9HC10 1997 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 TEX13DA0A0J9YY54 714 aaPredicted RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 MBLAC1A4D2B0 266 aaPredicted RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 OR2A25A4D2G3 310 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 A8MUI8 341 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 GOLGA8SH3BPF8 625 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 H7C0C1 242 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 PIRO00625 290 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 CTDSP2O14595 271 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 ZNF195O14628 629 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 XPO1O14980 1071 aaKnown RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 PAPSS1O43252 624 aaPredicted RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 DENRO43583 198 aaKnown RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 CIDEAO60543 219 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 CNMDO75829 334 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 CABYRO75952 493 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 AP2A1O95782 977 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 APRTP07741 180 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 RPSAP08865 295 aaKnown RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 CD48P09326 243 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 LINGO3P0C6S8 592 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 ANPEPP15144 967 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 GJA1P17302 382 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 HOXB8P17481 243 aaPredicted RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 ARF4P18085 180 aaPredicted RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 BGNP21810 368 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 WARSP23381 471 aaKnown RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 SP100P23497 879 aaPredicted RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 CYP2F1P24903 491 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 ITGA3P26006 1051 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 SERPINB6P35237 376 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 PSMC4P43686 418 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 ATP5OP48047 213 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 NPY2RP49146 381 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 SERPINB8P50452 374 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 NR0B1P51843 470 aaKnown RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 KPNA2P52292 529 aaKnown RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 NDST1P52848 882 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 LIMK2P53671 638 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 AQP5P55064 265 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 MTTPP55157 894 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 CCNA1P78396 465 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 KCNJ10P78508 379 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 PPP2R2BQ00005 443 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 ARHGAP1Q07960 439 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 PLA2G7Q13093 441 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 DPYSQ14117 519 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 BTG3Q14201 252 aaPredicted RBP4.36□□□□□ -1.71
SSR3-209ENST00000498205 MELKQ14680 651 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 KCTD2Q14681 263 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 HSDL1Q3SXM5 330 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 FAM205BPQ63HN1 556 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 KCTD11Q693B1 232 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 CDHR3Q6ZTQ4 885 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 FAM183BPQ6ZVS7 135 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 ARMCX2Q7L311 632 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 DHDDSQ86SQ9 333 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 PRUNE1Q86TP1 453 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 LINC00523Q86TU6 105 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 KBTBD6Q86V97 674 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 NDUFAF2Q8N183 169 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 TMEM86AQ8N2M4 240 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 CHCHD4Q8N4Q1 142 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 MARVELD2Q8N4S9 558 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 MOSPD2Q8NHP6 518 aa4.36□□□□□ -1.71
SSR3-209ENST00000498205 FAM172AQ8WUF8 416 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms