RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	UCN3	Q969E3	161 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CMTM7	Q96FZ5	175 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	OR4K3	Q96R72	315 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	FNDC11	Q9BVV2	318 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	OR51B5	Q9H339	312 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	DNAJC11	Q9NVH1	559 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	NDUFB11	Q9NX14	153 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	SEC14L3	Q9UDX4	400 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	PGAP2	Q9UHJ9	254 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	SLC13A4	Q9UKG4	626 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597	RASD1	Q9Y272	281 aa		10.09	□□□□□ -0.79
TRAPPC12-223	ENST00000497597		M0R3H8	397 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	GMDS	O60547	372 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ATG13	O75143	517 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TRIM3	O75382	744 aa	Predicted RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ATG12	O94817	140 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TCRB	P04435	133 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	H1F0	P07305	194 aa	Known RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SRPRA	P08240	638 aa	Known RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	UCHL1	P09936	223 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	OR56A5	P0C7T3	313 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	HOXB6	P17509	224 aa	Known RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	AMD1	P17707	334 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TACR2	P21452	398 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	F8A1	P23610	371 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ACSL1	P33121	698 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	EVX1	P49640	407 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	HSPB3	Q12988	150 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	DOC2A	Q14183	400 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ATXN7L3	Q14CW9	347 aa	Predicted RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ALG1L	Q6GMV1	187 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ATRAID	Q6UW56	229 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SERPINA13P	Q6UXR4	307 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	LINGO2	Q7L985	606 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	GPALPP1	Q8IXQ4	340 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	LINC00518	Q8N0U6	118 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	KRT78	Q8N1N4	520 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	PPCDC	Q96CD2	204 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SECISBP2	Q96T21	854 aa	Known RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TMEM248	Q9NWD8	314 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TRPS1	Q9UHF7	1281 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	PCDHGB7	Q9Y5F8	929 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ENPP4	Q9Y6X5	453 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597		A0A0G2JN53	185 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ARL5C	A6NH57	179 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	FAM183A	A6NL82	134 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	OR2AG2	A6NM03	316 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SLC28A2	O43868	658 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	KLK8	O60259	260 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	KCNE1	P15382	129 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ACVR1B	P36896	505 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CTAG1A	P78358	180 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SNTB2	Q13425	540 aa	Known RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SERPINA12	Q8IW75	414 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CLDN22	Q8N7P3	220 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	DBF4B	Q8NFT6	615 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	OR51G2	Q8NGK0	314 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	RPLP0P6	Q8NHW5	317 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CREB3L1	Q96BA8	519 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	WDFY2	Q96P53	400 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	FAM120C	Q9NX05	1096 aa	Known RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CFAP97	Q9P2B7	532 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	OARD1	Q9Y530	152 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ANK1	P16157	1881 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	OSM	P13725	252 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SHC1	P29353	583 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CBX5	P45973	191 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CDH11	P55287	796 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	OR10A3	P58181	314 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	UBE2M	P61081	183 aa	Known RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	PURA	Q00577	322 aa	Known RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ZNF273	Q14593	569 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CLLU1	Q5K131	121 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SLC6A19	Q695T7	634 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CEACAM20	Q6UY09	585 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	MON1A	Q86VX9	555 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SIAH3	Q8IW03	269 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	RTP3	Q9BQQ7	232 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	C1QTNF3	Q9BXJ4	246 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	EGLN3	Q9H6Z9	239 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	RC3H2	Q9HBD1	1191 aa	Known RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ZFYVE1	Q9HBF4	777 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ZFP64	Q9NPA5	681 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	OR10H1	Q9Y4A9	318 aa		10.08	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	GLYATL1P3	A0A0U1RQE8	302 aa		10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	GABRP	O00591	440 aa		10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	FRS3	O43559	492 aa		10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	NARS	O43776	548 aa	Known RBP	10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CELF2	O95319	508 aa	Known RBP	10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	HLA-DPB1	P04440	258 aa		10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ALPPL2	P10696	532 aa		10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	BPI	P17213	487 aa		10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SEC23B	Q15437	767 aa		10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	MANEAL	Q5VSG8	457 aa		10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	C18orf63	Q68DL7	685 aa		10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ACSM5	Q6NUN0	579 aa		10.07	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	FAAP20	Q6NZ36	180 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms