RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 NDE1Q9NXR1 346 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 PRODH2Q9UF12 536 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 AP3M1Q9Y2T2 418 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 CCDC88CQ9P219 2028 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 TRBV5-3A0A0A0MS03 114 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 NSG1A0A0A6YYJ2 146 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 OR2W5A6NFC9 320 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 FBP2O00757 339 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 KLK10O43240 276 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 PRAMEF2O60811 474 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 ATP5HO75947 161 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 DDAH2O95865 285 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 KRT16P08779 473 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 SLC26A5P58743 744 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 RPS18P62269 152 aaKnown RBP18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 ID2Q02363 134 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 IL10RAQ13651 578 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 ZNF750Q32MQ0 723 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 TRMT5Q32P41 509 aaKnown RBP18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 MMEL1Q495T6 779 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 BROXQ5VW32 411 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 JMJD6Q6NYC1 403 aaPredicted RBP18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 DLEU7Q6UYE1 221 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 KDF1Q8NAX2 398 aaPredicted RBP18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 MIPOL1Q8TD10 442 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 ZNF721Q8TF20 911 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 RNF31Q96EP0 1072 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 VMP1Q96GC9 406 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 SH3GL1Q99961 368 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 PAIP1Q9H074 479 aaKnown RBP18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 RAD21L1Q9H4I0 556 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 MAP10Q9P2G4 905 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 COPS7AQ9UBW8 275 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 CORO2BQ9UQ03 480 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 ERVK-11Q9UQG0 969 aa18.4■□□□□ 0.54
SCAMP3-209ENST00000497470 C15orf38-AP3S2A0A0A6YYH1 394 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 LOC100653049A0A140TA62 436 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 A0A1W2PS29 197 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 UPK1AO00322 258 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 KRT34O76011 436 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 KRT75O95678 551 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 ABCB1P08183 1280 aaPredicted RBP18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 GPC1P35052 558 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 CCT3P49368 545 aaKnown RBP18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 SLC37A1P57057 533 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 DCAF7P61962 342 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 COL9A2Q14055 689 aaPredicted RBP18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 PAGE3Q5JUK9 113 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 EXOSC6Q5RKV6 272 aaKnown RBP18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 ARPINQ7Z6K5 226 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 RETREG3Q86VR2 466 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 PROSER1Q86XN7 944 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 SPACA3Q8IXA5 215 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 CLECL1Q8IZS7 167 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 LGI4Q8N135 537 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 ZNF615Q8N8J6 731 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 APCDD1LQ8NCL9 501 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 OR4A15Q8NGL6 344 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 NUBPLQ8TB37 319 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 SLC2A12Q8TD20 617 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 ELP5Q8TE02 316 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 NUDT8Q8WV74 236 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 PPWD1Q96BP3 646 aaKnown RBP18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 NEURL3Q96EH8 262 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 HOPXQ9BPY8 73 aaPredicted RBP18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 C1orf21Q9H246 121 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 THUMPD1Q9NXG2 353 aaKnown RBP18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 POLHQ9Y253 713 aa18.39■□□□□ 0.53
SCAMP3-209ENST00000497470 C9JVG2 144 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 MRASO14807 208 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 OTX2P32243 289 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 ANXA11P50995 505 aaKnown RBP18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 CLCN2P51788 898 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 HSPB3Q12988 150 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 AIMP2Q13155 320 aaKnown RBP18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 ZNF267Q14586 743 aaPredicted RBP18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 MYBPC3Q14896 1274 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 AP1ARQ63HQ0 302 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 SAXO2Q658L1 398 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 REP15Q6BDI9 236 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 LRRC69Q6ZNQ3 347 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 OR7G2Q8NG99 324 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 OR5L2Q8NGL0 311 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 TP53INP1Q96A56 240 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 FAM120BQ96EK7 910 aaKnown RBP18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 MS4A4EQ96PG1 132 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 EPS8L2Q9H6S3 715 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 CXorf36Q9H7Y0 433 aa18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 DDX18Q9NVP1 670 aaKnown RBP18.38■□□□□ 0.53
SCAMP3-209ENST00000497470 ACACAQ13085 2346 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 DUXAA6NLW8 204 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 EBAG9O00559 213 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 ASNA1O43681 348 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 ANP32DO95626 131 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 CBX7O95931 251 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 AGR2O95994 175 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 SERPINA7P05543 415 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 CT62P0C5K7 136 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 ESRRAP11474 423 aaPredicted RBP18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 MAP3K8P41279 467 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms