RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 NLGN3Q9NZ94 848 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 KLHL8Q9P2G9 620 aaPredicted RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 SHOC2Q9UQ13 582 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 EXOGQ9Y2C4 368 aaKnown RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 MYRFQ9Y2G1 1151 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 PLEKHA6Q9Y2H5 1048 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 PLEKHM1Q9Y4G2 1056 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 TNFRSF18Q9Y5U5 241 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 CEPT1Q9Y6K0 416 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 EIF4G3O43432 1585 aaKnown RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A1W2PP64 1363 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 CARMIL3Q8ND23 1372 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 AKAP12Q02952 1782 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CASZ1Q86V15 1759 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A0U1RQS6 177 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A1B0GW15 77 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 LNP1A1A4G5 178 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CLEC18AA5D8T8 446 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 MGAT4DA6NG13 374 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 TUBAL3A6NHL2 446 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GLOD5A6NK44 160 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 LIPT2A6NK58 231 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 C4orf47A7E2U8 309 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CLCA1A8K7I4 914 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 KCNK1O00180 336 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PEX12O00623 359 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 HS3ST1O14792 307 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 DLEU1O43261 78 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 DCXO43602 365 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 FADS1O60427 444 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 RNASEH1O60930 286 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC22A5O76082 557 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 LY86O95711 162 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SNAI1O95863 264 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 DDAH2O95865 285 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 TFAP2AP05549 437 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 HOXC4P09017 264 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SMIM18P0DKX4 95 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CD19P15391 556 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 RPA2P15927 270 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 TNFRSF1AP19438 455 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 TACR2P21452 398 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT1A4P22310 534 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CYP2F1P24903 491 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 FPR3P25089 353 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 IL1R2P27930 398 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 DCTDP32321 178 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT1A3P35503 534 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT1A5P35504 534 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SREBF1P36956 1147 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GNPDA1P46926 289 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 TGM4P49221 684 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 KHKP50053 298 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CCR8P51685 355 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GPR143P51810 404 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CDH15P55291 814 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 DAOAP59103 153 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 RPS7P62081 194 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 MYL7Q01449 175 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 BDH1Q02338 343 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 BTN1A1Q13410 526 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 DNASE1L3Q13609 305 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 BOP1Q14137 746 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ZFP69Q49AA0 526 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 IFI44LQ53G44 452 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC35D3Q5M8T2 416 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CST9LP1Q5W188 147 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 NCR3LG1Q68D85 454 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ABLIM2Q6H8Q1 611 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC27A4Q6P1M0 643 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CLEC18BQ6UXF7 455 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SPNS3Q6ZMD2 512 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 WDR88Q6ZMY6 472 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 EIF3MQ7L2H7 374 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC16A14Q7RTX9 510 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ABHD12BQ7Z5M8 362 aaPredicted RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PIGWQ7Z7B1 504 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ADGRE4PQ86SQ3 457 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ZDHHC21Q8IVQ6 265 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SERPINA12Q8IW75 414 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CFAP206Q8IYR0 622 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 Q8N1X5 172 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CYB561A3Q8NBI2 242 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 CLEC18CQ8NCF0 446 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SEMA6DQ8NFY4 1073 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 OR13F1Q8NGS4 319 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 BRIX1Q8TDN6 353 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 C16orf78Q8WTQ4 265 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 DUSP19Q8WTR2 217 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 SFT2D1Q8WV19 159 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 GTF2H4Q92759 462 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.93□□□□□ -1.943e-8■■■■■ 70.6
SNRNP48-202ENST00000496946 DCPSQ96C86 337 aaKnown RBP2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 ZHX1-C8orf76Q96EF9 292 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 MAP3K3Q99759 626 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 KLHDC3Q9BQ90 382 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM47Q9BQJ4 181 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 BTBD10Q9BSF8 475 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 PCGF1Q9BSM1 259 aa2.93□□□□□ -1.94
SNRNP48-202ENST00000496946 TSSK1BQ9BXA7 367 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms