RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 RNF6Q9Y252 685 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 CFL2Q9Y281 166 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 LIPGQ9Y5X9 500 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 CHCHD2Q9Y6H1 151 aaPredicted RBP11.73□□□□□ -0.53
PTPRF-214ENST00000496043 NCOA6Q14686 2063 aaPredicted RBP11.72□□□□□ -0.53
PTPRF-214ENST00000496043 FIGNL2A6NMB9 653 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 ULK1O75385 1050 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 ERAL1O75616 437 aaKnown RBP11.72□□□□□ -0.53
PTPRF-214ENST00000496043 GSTA1P08263 222 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 CELA3AP09093 270 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 FAM153BP0C7A2 387 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 RHOXF2BP0C7M4 288 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 RFPL3SP0C7P2 107 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 HSD3B1P14060 373 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 S1PR1P21453 382 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 HSD3B2P26439 372 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 ACVR2AP27037 513 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 SSTR2P30874 369 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 FEN1P39748 380 aaKnown RBP11.72□□□□□ -0.53
PTPRF-214ENST00000496043 TMED10P49755 219 aaKnown RBP11.72□□□□□ -0.53
PTPRF-214ENST00000496043 PRKAA2P54646 552 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 NUP107P57740 925 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 RPP38P78345 283 aaKnown RBP11.72□□□□□ -0.53
PTPRF-214ENST00000496043 FAM153CQ494X1 144 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 TMEM64Q6YI46 380 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 GPRIN3Q6ZVF9 776 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 ZNF295-AS1Q8N0V1 137 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 C1orf52Q8N6N3 182 aaKnown RBP11.72□□□□□ -0.53
PTPRF-214ENST00000496043 CDYL2Q8N8U2 506 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 CHTF18Q8WVB6 975 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 DIO2Q92813 273 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 ADIPOR1Q96A54 375 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 JSRP1Q96MG2 331 aaPredicted RBP11.72□□□□□ -0.53
PTPRF-214ENST00000496043 SECISBP2Q96T21 854 aaKnown RBP11.72□□□□□ -0.53
PTPRF-214ENST00000496043 RHOXF2Q9BQY4 288 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 DOHHQ9BU89 302 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 ENKD1Q9H0I2 346 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 ACKR4Q9NPB9 350 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 KCNJ16Q9NPI9 418 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 ALKBH4Q9NXW9 302 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 FETUBQ9UGM5 382 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 STK38LQ9Y2H1 464 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 ZNF780BQ9Y6R6 833 aa11.72□□□□□ -0.53
PTPRF-214ENST00000496043 CCDC151A5D8V7 595 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 GOLGA8RI6L899 631 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 WDR1O75083 606 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 SNX4O95219 450 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 ESRRBO95718 433 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 PYGBP11216 843 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 NAGAP17050 411 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 KRT15P19012 456 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 HMOX2P30519 316 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 CSTF3Q12996 717 aaKnown RBP11.71□□□□□ -0.53
PTPRF-214ENST00000496043 PRICKLE4Q2TBC4 344 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 FAM111BQ6SJ93 734 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 B3GNT6Q6ZMB0 384 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 MEX3BQ6ZN04 569 aaKnown RBP11.71□□□□□ -0.53
PTPRF-214ENST00000496043 PACS2Q86VP3 889 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 CCDC71Q8IV32 467 aaPredicted RBP11.71□□□□□ -0.53
PTPRF-214ENST00000496043 LRRC25Q8N386 305 aaPredicted RBP11.71□□□□□ -0.53
PTPRF-214ENST00000496043 VWA5B2Q8N398 1253 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 LIX1Q8N485 282 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 RPRMLQ8N4K4 120 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 GBP7Q8N8V2 638 aaPredicted RBP11.71□□□□□ -0.53
PTPRF-214ENST00000496043 C17orf47Q8NEP4 570 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 SPPL2AQ8TCT8 520 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 ZNF382Q96SR6 550 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 TTYH2Q9BSA4 534 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 TRIM8Q9BZR9 551 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 UCK2Q9BZX2 261 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 BRINP2Q9C0B6 783 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 PSMC3IPQ9P2W1 217 aaPredicted RBP11.71□□□□□ -0.53
PTPRF-214ENST00000496043 B4GALT7Q9UBV7 327 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 BCAP29Q9UHQ4 241 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 MCM8Q9UJA3 840 aa11.71□□□□□ -0.53
PTPRF-214ENST00000496043 CRYBG3Q68DQ2 2970 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 TRIM3O75382 744 aaPredicted RBP11.7□□□□□ -0.54
PTPRF-214ENST00000496043 ATP1B1P05026 303 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 GLI4P10075 376 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 DRD2P14416 443 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 GABRA1P14867 456 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 ALDH9A1P49189 494 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 PKNOX1P55347 436 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 FBXW4P57775 412 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 MGAT2Q10469 447 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 RPS6KA2Q15349 733 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 NEIL3Q8TAT5 605 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 KLHL29Q96CT2 875 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 TRIM44Q96DX7 344 aaPredicted RBP11.7□□□□□ -0.54
PTPRF-214ENST00000496043 CCDC126Q96EE4 140 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 L3HYPDHQ96EM0 354 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 HSPBAP1Q96EW2 488 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 C14orf79Q96F83 325 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 LURAP1Q96LR2 239 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 TMEM237Q96Q45 408 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 HBEGFQ99075 208 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 ANGPTL4Q9BY76 406 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 TXLNGYQ9BZA5 131 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 ZNF703Q9H7S9 590 aaPredicted RBP11.7□□□□□ -0.54
PTPRF-214ENST00000496043 MAT2BQ9NZL9 334 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms