RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	ERP27	Q96DN0	273 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	CNRIP1	Q96F85	164 aa	Predicted RBP	11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	PKNOX2	Q96KN3	472 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	SGCZ	Q96LD1	299 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	OR10A5	Q9H207	317 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	TUBB1	Q9H4B7	451 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	LRTM1	Q9HBL6	345 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	KCNK9	Q9NPC2	374 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	MYNN	Q9NPC7	610 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	PFDN4	Q9NQP4	134 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	GIMAP4	Q9NUV9	329 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	CFL2	Q9Y281	166 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	TMED5	Q9Y3A6	229 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	FLNC	Q14315	2725 aa		11.45	□□□□□ -0.58
MRPL55-233	ENST00000495899	CPAMD8	Q8IZJ3	1885 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	C2orf92	A0A1B0GVN3	265 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	TMEM114	B3SHH9	223 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	BCAS2	O75934	225 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	OR6B1	O95007	311 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	CLPS	P04118	112 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	SERPINE1	P05121	402 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	CT62	P0C5K7	136 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	LINC00032	P0C843	101 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	S1PR1	P21453	382 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	MPI	P34949	423 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	SOX3	P41225	446 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	UQCRFS1	P47985	274 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	ST13	P50502	369 aa	Known RBP	11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	PRR20E	P86478	221 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	PRR20C	P86479	221 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	PRR20D	P86480	221 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	PRR20B	P86481	221 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	PRR20A	P86496	221 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	C2orf80	Q0P641	193 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	MGAT2	Q10469	447 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	MRPL49	Q13405	166 aa	Known RBP	11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	MPP2	Q14168	576 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	EBP	Q15125	230 aa	Known RBP	11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	KRTCAP3	Q53RY4	240 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	FAM71E1	Q6IPT2	247 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	IL20RB	Q6UXL0	311 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	RTL4	Q6ZR62	310 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	MDGA2	Q7Z553	956 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	DDIAS	Q8IXT1	998 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	KIRREL3	Q8IZU9	778 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	FAM26E	Q8N5C1	309 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	TWIST2	Q8WVJ9	160 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	FCRL1	Q96LA6	429 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	FRMD6	Q96NE9	622 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	EBPL	Q9BY08	206 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	HES7	Q9BYE0	225 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	WWTR1	Q9GZV5	400 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	SLC35C2	Q9NQQ7	365 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	MAT2B	Q9NZL9	334 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	ZNF639	Q9UID6	485 aa		11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPL55-233	ENST00000495899	LSM1	O15116	133 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	PEX1	O43933	1283 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	SSTR4	P31391	388 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	ARRB2	P32121	409 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	TDGF1P3	P51864	188 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	ALDH6A1	Q02252	535 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	UBAP2L	Q14157	1087 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	CASP8	Q14790	479 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	CHI3L2	Q15782	390 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	ZNF791	Q3KP31	576 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	RFTN2	Q52LD8	501 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	FHL5	Q5TD97	284 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	HLA-DQA1	Q5Y7H0	255 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	SULF2	Q8IWU5	870 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	CCDC116	Q8IYX3	515 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	TAGAP	Q8N103	731 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	ZNF441	Q8N8Z8	693 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	PSD4	Q8NDX1	1056 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	OR2T11	Q8NH01	316 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	ZNF675	Q8TD23	568 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	DOK4	Q8TEW6	326 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	ZNF764	Q96H86	408 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	PPP3R2	Q96LZ3	170 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	BRINP2	Q9C0B6	783 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	TMBIM4	Q9HC24	238 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	MIEF1	Q9NQG6	463 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	ZDHHC2	Q9UIJ5	367 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	ENTPD4	Q9Y227	616 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	FIS1	Q9Y3D6	152 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	POLR3H	Q9Y535	204 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	PTGDR2	Q9Y5Y4	395 aa		11.43	□□□□□ -0.58
MRPL55-233	ENST00000495899	SPEN	Q96T58	3664 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	WDR91	A4D1P6	747 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	CAPN14	A8MX76	684 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	MYO1G	B0I1T2	1018 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	TMEM233	B4DJY2	109 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	PIP5K1B	O14986	540 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	ZNF354A	O60765	605 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	SLITRK5	O94991	958 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	NADK	O95544	446 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	HSPA4L	O95757	839 aa		11.42	□□□□□ -0.58

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