RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 SMYD2Q9NRG4 433 aa16.02■□□□□ 0.16
TMEM53-209ENST00000495630 LYARQ9NX58 379 aaKnown RBP16.02■□□□□ 0.16
TMEM53-209ENST00000495630 TEX10Q9NXF1 929 aaPredicted RBP16.02■□□□□ 0.16
TMEM53-209ENST00000495630 TXNDC16Q9P2K2 825 aa16.02■□□□□ 0.16
TMEM53-209ENST00000495630 OPTCQ9UBM4 332 aa16.02■□□□□ 0.16
TMEM53-209ENST00000495630 PCDHGA11Q9Y5H2 935 aa16.02■□□□□ 0.16
TMEM53-209ENST00000495630 NSD1Q96L73 2696 aaPredicted RBP16.02■□□□□ 0.15
TMEM53-209ENST00000495630 FREM3P0C091 2139 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 JMJD1CQ15652 2540 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 A0A1W2PPR1 153 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 SH3D21A4FU49 640 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 PRKRAO75569 313 aaKnown RBP16.01■□□□□ 0.15
TMEM53-209ENST00000495630 RCBTB2O95199 551 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 SSTR4P31391 388 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 GCKP35557 465 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 FUT7Q11130 342 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 DDX39BQ13838 428 aaKnown RBP16.01■□□□□ 0.15
TMEM53-209ENST00000495630 POU4F3Q15319 338 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 CAPN12Q6ZSI9 719 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 ISCA2Q86U28 154 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 P3H2Q8IVL5 708 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 SLC35F6Q8N357 371 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 ZNF615Q8N8J6 731 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 OR1J4Q8NGS1 313 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 ADIPOR1Q96A54 375 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 UCN2Q96RP3 112 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 GPR22Q99680 433 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 PSD3Q9NYI0 1048 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 NDRG3Q9UGV2 375 aa16.01■□□□□ 0.15
TMEM53-209ENST00000495630 EIF3LQ9Y262 564 aaKnown RBP16.01■□□□□ 0.15
TMEM53-209ENST00000495630 FN1P02751 2386 aaKnown RBP16■□□□□ 0.15
TMEM53-209ENST00000495630 A0A0A6YYD5 115 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 GLOD5A6NK44 160 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 TP73O15350 636 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 PIAS1O75925 651 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 SEC31AO94979 1220 aaKnown RBP16■□□□□ 0.15
TMEM53-209ENST00000495630 FAM58BPP0C7Q3 252 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 NR2F6P10588 404 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 EPB42P16452 691 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 NAGAP17050 411 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 PTPN6P29350 595 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 DR1Q01658 176 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 FOXF2Q12947 444 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 DCST1Q5T197 706 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 LIPJQ5W064 366 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 CYP20A1Q6UW02 462 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 PRSS57Q6UWY2 283 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 CYS1Q717R9 158 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 PRIMA1Q86XR5 153 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 RNF175Q8N4F7 328 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 FAM83FQ8NEG4 500 aaPredicted RBP16■□□□□ 0.15
TMEM53-209ENST00000495630 C17orf47Q8NEP4 570 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 CDKL2Q92772 493 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 WNT2BQ93097 391 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 PIGTQ969N2 578 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 MTERF1Q99551 399 aaKnown RBP16■□□□□ 0.15
TMEM53-209ENST00000495630 CPNE1Q99829 537 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 ZNF717Q9BY31 904 aaPredicted RBP16■□□□□ 0.15
TMEM53-209ENST00000495630 OR10A5Q9H207 317 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 ACBD3Q9H3P7 528 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 PIGMQ9H3S5 423 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 GALNT8Q9NY28 637 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 NUDT4Q9NZJ9 180 aa16■□□□□ 0.15
TMEM53-209ENST00000495630 CXorf49A8MYA2 514 aaPredicted RBP15.99■□□□□ 0.15
TMEM53-209ENST00000495630 TMPRSS11DO60235 418 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 EEDO75530 441 aaKnown RBP15.99■□□□□ 0.15
TMEM53-209ENST00000495630 ABCB1P08183 1280 aaPredicted RBP15.99■□□□□ 0.15
TMEM53-209ENST00000495630 ABCD3P28288 659 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 BSGP35613 385 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 SLCO1A2P46721 670 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 CPA2P48052 419 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 RAB10P61026 200 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 RPS13P62277 151 aaKnown RBP15.99■□□□□ 0.15
TMEM53-209ENST00000495630 PHEXP78562 749 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 GAB1Q13480 694 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 CUL3Q13618 768 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 ZKSCAN8Q15776 578 aaPredicted RBP15.99■□□□□ 0.15
TMEM53-209ENST00000495630 SLC30A6Q6NXT4 461 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 TMEM81Q6P7N7 255 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 SCIMPQ6UWF3 145 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 ENPP6Q6UWR7 440 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 ADGRE4PQ86SQ3 457 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 LUZP2Q86TE4 346 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 YRDCQ86U90 279 aaKnown RBP15.99■□□□□ 0.15
TMEM53-209ENST00000495630 ZBED8Q8IZ13 594 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 OR7G1Q8NGA0 311 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 UBTD2Q8WUN7 234 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 SLC44A1Q8WWI5 657 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 EXT2Q93063 718 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 COX4I2Q96KJ9 171 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 RBBP8Q99708 897 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 MDFIQ99750 246 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 TUBA1CQ9BQE3 449 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 BDH2Q9BUT1 245 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 ALG9Q9H6U8 611 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 NMRAL1Q9HBL8 299 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 FBN3Q75N90 2809 aa15.99■□□□□ 0.15
TMEM53-209ENST00000495630 A8MXE2 369 aa15.98■□□□□ 0.15
TMEM53-209ENST00000495630 GNB5O14775 395 aa15.98■□□□□ 0.15
TMEM53-209ENST00000495630 PGRMC2O15173 223 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms