RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 FUT7Q11130 342 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 ZNF169Q14929 603 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 RPS6KA2Q15349 733 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 LTB4RQ15722 352 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 CEBPEQ15744 281 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 CPTPQ5TA50 214 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 SLC6A19Q695T7 634 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 FAM111BQ6SJ93 734 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 ACAD11Q709F0 780 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 LARP4Q71RC2 724 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 PRICKLE2Q7Z3G6 844 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 NATD1Q8N6N6 113 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 NUBPLQ8TB37 319 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 SLC22A8Q8TCC7 542 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 ZNF675Q8TD23 568 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 ASB15Q8WXK1 588 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 TMEM125Q96AQ2 219 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 ERP27Q96DN0 273 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 ZBED6CLQ96FA7 236 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 ZNF764Q96H86 408 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 NPAS2Q99743 824 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 DPY30Q9C005 99 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 WDR55Q9H6Y2 383 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 LIN28AQ9H9Z2 209 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 ANKRD10Q9NXR5 420 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 MAT2BQ9NZL9 334 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 LRFN1Q9P244 771 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 PRODH2Q9UF12 536 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 EXO1Q9UQ84 846 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 ERVK-11Q9UQG0 969 aa11.22□□□□□ -0.61
CSNK1E-213ENST00000495232 TTLL8A6PVC2 850 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 A8MVJ9 347 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 TCP11X1B4DZS4 312 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 MAN1A2O60476 641 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 CD46P15529 392 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 PTGER1P34995 402 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 CD96P40200 585 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 TNFSF10P50591 281 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 DIO3P55073 304 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 CLDN8P56748 225 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 NRG3P56975 720 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 MRPS35P82673 323 aaKnown RBP11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 DUSP2Q05923 314 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 HSPB3Q12988 150 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 TUBA3CQ13748 450 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 PDE7AQ13946 482 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 EXOSC7Q15024 291 aaKnown RBP11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 OR1C1Q15619 314 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 MPEG1Q2M385 716 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 PGS1Q32NB8 556 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 SLC9B1Q4ZJI4 515 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 ZNF628Q5EBL2 1059 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 OGFOD2Q6N063 350 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 TUBA3EQ6PEY2 450 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 OPN5Q6U736 354 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 RGS9BPQ6ZS82 235 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 Q6ZS92 163 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 C9orf40Q8IXQ3 194 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 TAGAPQ8N103 731 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 ARMC10Q8N2F6 343 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 KRTCAP2Q8N6L1 136 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 CATSPER1Q8NEC5 780 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 OR52R1Q8NGF1 315 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 CEP70Q8NHQ1 597 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 ACTRT2Q8TDY3 377 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 KAT2AQ92830 837 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 CIDECQ96AQ7 238 aaPredicted RBP11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 C5orf34Q96MH7 638 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 AMDHD1Q96NU7 426 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 WWTR1Q9GZV5 400 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 GLIPR2Q9H4G4 154 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 HPF1Q9NWY4 346 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 TAS2R9Q9NYW1 312 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 MAP10Q9P2G4 905 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 ATP6V1HQ9UI12 483 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 CSAG2Q9Y5P2 127 aa11.21□□□□□ -0.61
CSNK1E-213ENST00000495232 TLN1Q9Y490 2541 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 CAPN14A8MX76 684 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 POLR3GO15318 223 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 SUV39H1O43463 412 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 COQ9O75208 318 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 C1QL1O75973 258 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 IDO1P14902 403 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 TRHRP34981 398 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 ST13P50502 369 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 HLCSP50747 726 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 CLNS1AP54105 237 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 AQP5P55064 265 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 MGAT2Q10469 447 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 EBPQ15125 230 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 PRSS53Q2L4Q9 553 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 PLEKHN1Q494U1 663 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 TRMT12Q53H54 448 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 ZNF385BQ569K4 471 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 COLEC12Q5KU26 742 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 EPGNQ6UW88 154 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 TMEM107Q6UX40 140 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 C16orf47Q6ZP98 133 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 GPALPP1Q8IXQ4 340 aa11.2□□□□□ -0.62
CSNK1E-213ENST00000495232 CYP4Z2PQ8N1L4 340 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms