RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 MAP4K2Q12851 820 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 EBPQ15125 230 aaKnown RBP14.75□□□□□ -0.05
LIME1-209ENST00000494776 RFTN2Q52LD8 501 aaPredicted RBP14.75□□□□□ -0.05
LIME1-209ENST00000494776 AGBL2Q5U5Z8 902 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 HDXQ7Z353 690 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 ZNF227Q86WZ6 799 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 TAGAPQ8N103 731 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 SLC15A4Q8N697 577 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 GOLGA6L1Q8N7Z2 621 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 ST6GALNAC3Q8NDV1 305 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 PRR7Q8TB68 274 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 NR4A3Q92570 626 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 GFM2Q969S9 779 aaKnown RBP14.75□□□□□ -0.05
LIME1-209ENST00000494776 TLCD1Q96CP7 247 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 ZNF681Q96N22 645 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 ZNF395Q9H8N7 513 aaPredicted RBP14.75□□□□□ -0.05
LIME1-209ENST00000494776 MAT2BQ9NZL9 334 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 CFL2Q9Y281 166 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 TENM4Q6N022 2769 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 ATP6AP2A0A1C7CYW4 349 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 PEX1O43933 1283 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 ATP6AP2O75787 350 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 CLPSP04118 112 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 TACR1P25103 407 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 NTSP30990 170 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 NR0B1P51843 470 aaKnown RBP14.74□□□□□ -0.05
LIME1-209ENST00000494776 NCBP2P52298 156 aaKnown RBP eCLIP14.74□□□□□ -0.052e-18■■□□□ 12.4
LIME1-209ENST00000494776 NRG3P56975 720 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 SRSF11Q05519 484 aaKnown RBP14.74□□□□□ -0.05
LIME1-209ENST00000494776 EXOSC7Q15024 291 aaKnown RBP14.74□□□□□ -0.05
LIME1-209ENST00000494776 LTB4RQ15722 352 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 EIF2S3LQ2VIR3 472 aaKnown RBP14.74□□□□□ -0.05
LIME1-209ENST00000494776 CES4AQ5XG92 561 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 RTL4Q6ZR62 310 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 MDGA2Q7Z553 956 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 SULF2Q8IWU5 870 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 FAM9CQ8IZT9 166 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 KIRREL3Q8IZU9 778 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 ZNF781Q8N8C0 355 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 ZNF615Q8N8J6 731 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 PSD4Q8NDX1 1056 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 OR9A2Q8NGT5 310 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 TUBGCP3Q96CW5 907 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 EGLN2Q96KS0 407 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 SGCZQ96LD1 299 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 TSSK3Q96PN8 268 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.74□□□□□ -0.05
LIME1-209ENST00000494776 RAP2CQ9Y3L5 183 aa14.74□□□□□ -0.05
LIME1-209ENST00000494776 CAPN14A8MX76 684 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 AKAP10O43572 662 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 BCAS2O75934 225 aaPredicted RBP14.73□□□□□ -0.05
LIME1-209ENST00000494776 LRATO95237 230 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 P04436 131 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 PCSK2P16519 638 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 SDC1P18827 310 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 ASMTP46597 345 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 MEOX1P50221 254 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 RPL14P50914 215 aaKnown RBP14.73□□□□□ -0.05
LIME1-209ENST00000494776 SLC18A1P54219 525 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 WDR4P57081 412 aaKnown RBP14.73□□□□□ -0.05
LIME1-209ENST00000494776 GPR85P60893 370 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 MRPS35P82673 323 aaKnown RBP14.73□□□□□ -0.05
LIME1-209ENST00000494776 MGAT2Q10469 447 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 PDCD2Q16342 344 aaPredicted RBP14.73□□□□□ -0.05
LIME1-209ENST00000494776 TRMT12Q53H54 448 aaKnown RBP14.73□□□□□ -0.05
LIME1-209ENST00000494776 FHL5Q5TD97 284 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 CPSF7Q8N684 471 aaKnown RBP14.73□□□□□ -0.05
LIME1-209ENST00000494776 FNDC5Q8NAU1 212 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 FAM13CQ8NE31 585 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 OR52R1Q8NGF1 315 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 CLHC1Q8NHS4 586 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 C16orf52Q8NHV5 167 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.73□□□□□ -0.05
LIME1-209ENST00000494776 ZNF675Q8TD23 568 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 KAT2AQ92830 837 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 TP53INP1Q96A56 240 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 PPP1R36Q96LQ0 422 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 C3orf30Q96M34 536 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 SLX1AQ9BQ83 275 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 PRODH2Q9UF12 536 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 GIMAP2Q9UG22 337 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 BAIAP2L1Q9UHR4 511 aa14.73□□□□□ -0.05
LIME1-209ENST00000494776 ASPDHA6ND91 283 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 ZNF354AO60765 605 aaPredicted RBP14.72□□□□□ -0.05
LIME1-209ENST00000494776 JUNP05412 331 aaKnown RBP14.72□□□□□ -0.05
LIME1-209ENST00000494776 BCKDHAP12694 445 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 DDX5P17844 614 aaKnown RBP14.72□□□□□ -0.05
LIME1-209ENST00000494776 S1PR1P21453 382 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 MST1P26927 711 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 BST1Q10588 318 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 ZNF628Q5EBL2 1059 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 XKR7Q5GH72 579 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 ATG16L1Q676U5 607 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 ZNF324BQ6AW86 544 aaPredicted RBP14.72□□□□□ -0.05
LIME1-209ENST00000494776 GFRALQ6UXV0 394 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 TRIM42Q8IWZ5 723 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 DND1Q8IYX4 353 aaKnown RBP14.72□□□□□ -0.05
LIME1-209ENST00000494776 GOLM1Q8NBJ4 401 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 POGLUT1Q8NBL1 392 aa14.72□□□□□ -0.05
LIME1-209ENST00000494776 OR5M3Q8NGP4 307 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms