RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ABI3Q9P2A4 366 aa7.54□□□□□ -1.2
RIF1-211ENST00000494333 SHANK1Q9Y566 2161 aa7.54□□□□□ -1.2
RIF1-211ENST00000494333 DOPEY2Q9Y3R5 2298 aa7.54□□□□□ -1.2
RIF1-211ENST00000494333 SCN3AQ9NY46 2000 aa7.54□□□□□ -1.2
RIF1-211ENST00000494333 HECTD1Q9ULT8 2610 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 DOCK10Q96BY6 2186 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 SETXQ7Z333 2677 aaKnown RBP7.53□□□□□ -1.2
RIF1-211ENST00000494333 hCG_2014768A0A024R1R8 64 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 A0A087X1B8 175 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 A0A096LPK6 155 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 IGKV3D-11A0A0A0MRZ8 115 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 GABRR3A8MPY1 467 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 B3GALT2O43825 422 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 KERAO60938 352 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 SH3BGRLO75368 114 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 CRYABP02511 175 aaKnown RBP7.53□□□□□ -1.2
RIF1-211ENST00000494333 PCNAP12004 261 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 MTHFD2P13995 350 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 TYK2P29597 1187 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 CASP2P42575 452 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 MSH2P43246 934 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 MTTPP55157 894 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 LIM2P55344 173 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 HSD17B7P56937 341 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 RAB38P57729 211 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 KCNK10P57789 538 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 RAC3P60763 192 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 HGFACQ04756 655 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 TGM3Q08188 693 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 SLC13A2Q13183 592 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 ACAP2Q15057 778 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 OR1C1Q15619 314 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 TBCCQ15814 346 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 INAQ16352 499 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.53□□□□□ -1.2
RIF1-211ENST00000494333 FAM83EQ2M2I3 478 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 ADPRMQ3LIE5 342 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 MED27Q6P2C8 311 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 GFRALQ6UXV0 394 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 LRRC70Q7Z2Q7 622 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 CENPLQ8N0S6 344 aaPredicted RBP7.53□□□□□ -1.2
RIF1-211ENST00000494333 MMGT1Q8N4V1 131 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 NFAM1Q8NET5 270 aaPredicted RBP7.53□□□□□ -1.2
RIF1-211ENST00000494333 CFHR4Q92496 578 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 GCDHQ92947 438 aaPredicted RBP7.53□□□□□ -1.2
RIF1-211ENST00000494333 UBE2E3Q969T4 207 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 QRFPRQ96P65 431 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 LRRC37BQ96QE4 947 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 F2RL3Q96RI0 385 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 SERINC2Q96SA4 455 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 HES7Q9BYE0 225 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 DEFB126Q9BYW3 111 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 COPS7BQ9H9Q2 264 aaPredicted RBP7.53□□□□□ -1.2
RIF1-211ENST00000494333 SNX15Q9NRS6 342 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 PNO1Q9NRX1 252 aaKnown RBP7.53□□□□□ -1.2
RIF1-211ENST00000494333 NINJ2Q9NZG7 142 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 NUDT4Q9NZJ9 180 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 PPP4R1LQ9P1A2 415 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 LRFN1Q9P244 771 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 OPTCQ9UBM4 332 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 MTRF1LQ9UGC7 380 aaKnown RBP7.53□□□□□ -1.2
RIF1-211ENST00000494333 MMACHCQ9Y4U1 282 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 ANGPTL3Q9Y5C1 460 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 CNTRLQ7Z7A1 2325 aa7.53□□□□□ -1.2
RIF1-211ENST00000494333 RP1L1Q8IWN7 2480 aaPredicted RBP7.53□□□□□ -1.2
RIF1-211ENST00000494333 SAGE2PA6NJ88 616 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 SYCE1LA8MT33 242 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 K7EPI3 171 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 RTCAO00442 366 aaKnown RBP7.52□□□□□ -1.21
RIF1-211ENST00000494333 CYR61O00622 381 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 WISP2O76076 250 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 MYO1DO94832 1006 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 UNC5CO95185 931 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 KLHL2O95198 593 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 ACSL3O95573 720 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 CLDN1O95832 211 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 STSP08842 583 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 CTAGE8P0CG41 777 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 GFAPP14136 432 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 MST1P26927 711 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 CERS1P27544 350 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 EEF1DP29692 281 aaKnown RBP7.52□□□□□ -1.21
RIF1-211ENST00000494333 CYB561P49447 251 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 CLCN2P51788 898 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 TDGF1P3P51864 188 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 HNRNPFP52597 415 aaKnown RBP7.52□□□□□ -1.21
RIF1-211ENST00000494333 MLF1P58340 268 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 PMP22Q01453 160 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 CD69Q07108 199 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 RCN2Q14257 317 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 MAPKAPK3Q16644 382 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 PFKFB4Q16877 469 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 UBAP2Q5T6F2 1119 aaKnown RBP7.52□□□□□ -1.21
RIF1-211ENST00000494333 SLC25A25Q6KCM7 469 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 KLC3Q6P597 504 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 GALNTL5Q7Z4T8 443 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 CCDC91Q7Z6B0 441 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 CLNKQ7Z7G1 428 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 FJX1Q86VR8 437 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 MYLK4Q86YV6 388 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms