RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 SLC7A13Q8TCU3 470 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 CREB3L4Q8TEY5 395 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 RNF31Q96EP0 1072 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 VMP1Q96GC9 406 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 MAGEB10Q96LZ2 347 aaPredicted RBP11.72□□□□□ -0.53
PHF3-205ENST00000494284 SIGLEC11Q96RL6 698 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 GLIPR2Q9H4G4 154 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 GDE1Q9NZC3 331 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 NTNG1Q9Y2I2 539 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 A0A1W2PQF6 199 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 LRIT2A6NDA9 550 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 KMOO15229 486 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 TLX2O43763 284 aaPredicted RBP11.72□□□□□ -0.53
PHF3-205ENST00000494284 CNOT3O75175 753 aaKnown RBP11.72□□□□□ -0.53
PHF3-205ENST00000494284 KLF8O95600 359 aaPredicted RBP11.72□□□□□ -0.53
PHF3-205ENST00000494284 CCT3P49368 545 aaKnown RBP11.72□□□□□ -0.53
PHF3-205ENST00000494284 CRISP1P54107 249 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 FAM46CQ5VWP2 391 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 ENPP7Q6UWV6 458 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 TMEM107Q6UX40 140 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 SLC46A3Q7Z3Q1 461 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 PARP16Q8N5Y8 322 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 ZBTB8BQ8NAP8 495 aaPredicted RBP11.72□□□□□ -0.53
PHF3-205ENST00000494284 SMPDL3AQ92484 453 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 KAT2AQ92830 837 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 TBC1D20Q96BZ9 403 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 GAS2L1Q99501 681 aaPredicted RBP11.72□□□□□ -0.53
PHF3-205ENST00000494284 BTBD1Q9H0C5 482 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 TMEM168Q9H0V1 697 aa11.72□□□□□ -0.53
PHF3-205ENST00000494284 ZCCHC3Q9NUD5 404 aaKnown RBP11.72□□□□□ -0.53
PHF3-205ENST00000494284 A0A1W2PR48 441 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 ISM1B1AKI9 464 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 ARHGAP33O14559 1287 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 CAPN5O15484 640 aaPredicted RBP11.71□□□□□ -0.53
PHF3-205ENST00000494284 CH25HO95992 272 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 NR2F1P10589 423 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 GABRB1P18505 474 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 TRIM23P36406 574 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 ZNF630Q2M218 657 aaPredicted RBP11.71□□□□□ -0.53
PHF3-205ENST00000494284 ITPRIPL2Q3MIP1 535 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 ZMAT1Q5H9K5 638 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 ARMC8Q8IUR7 673 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 ZFP41Q8N8Y5 198 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 ZCCHC10Q8TBK6 192 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 S100ZQ8WXG8 99 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 COL26A1Q96A83 441 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 TRMT61AQ96FX7 289 aaKnown RBP11.71□□□□□ -0.53
PHF3-205ENST00000494284 TREX2Q9BQ50 279 aaPredicted RBP11.71□□□□□ -0.53
PHF3-205ENST00000494284 CLEC1BQ9P126 229 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 YARS2Q9Y2Z4 477 aaKnown RBP11.71□□□□□ -0.53
PHF3-205ENST00000494284 DENND4AQ7Z401 1863 aa11.71□□□□□ -0.53
PHF3-205ENST00000494284 CLDN24A6NM45 220 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 KRT75O95678 551 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 ITGA2P17301 1181 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 TMED10P49755 219 aaKnown RBP11.71□□□□□ -0.54
PHF3-205ENST00000494284 NCBP2P52298 156 aaKnown RBP eCLIP11.71□□□□□ -0.54
PHF3-205ENST00000494284 PCBP3P57721 371 aaKnown RBP11.71□□□□□ -0.54
PHF3-205ENST00000494284 DAB2P98082 770 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 SLAMF1Q13291 335 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 LIPKQ5VXJ0 399 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 LYSMD2Q8IV50 215 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 OR1E3Q8WZA6 343 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 OTULINQ96BN8 352 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 CNRIP1Q96F85 164 aaPredicted RBP11.71□□□□□ -0.54
PHF3-205ENST00000494284 OR51I1Q9H343 314 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 TCEAL2Q9H3H9 227 aaPredicted RBP11.71□□□□□ -0.54
PHF3-205ENST00000494284 PALMDQ9NP74 551 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 SNTG1Q9NSN8 517 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 POU2F3Q9UKI9 436 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 TMCC3Q9ULS5 477 aa11.71□□□□□ -0.54
PHF3-205ENST00000494284 TLR4O00206 839 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 CELA2BP08218 269 aaPredicted RBP11.7□□□□□ -0.54
PHF3-205ENST00000494284 ERGP11308 486 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 PVRP15151 417 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 UQCRC2P22695 453 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 S100A5P33763 92 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 EIF2DP41214 584 aaKnown RBP11.7□□□□□ -0.54
PHF3-205ENST00000494284 PPP1CAP62136 330 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 REEP5Q00765 189 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 PRDX1Q06830 199 aaKnown RBP11.7□□□□□ -0.54
PHF3-205ENST00000494284 FADDQ13158 208 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 LRRC32Q14392 662 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 AGERQ15109 404 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 TBCEQ15813 527 aaPredicted RBP11.7□□□□□ -0.54
PHF3-205ENST00000494284 CRB2Q5IJ48 1285 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 DCST1Q5T197 706 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 OR4C11Q6IEV9 310 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 B3GLCTQ6Y288 498 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 KIAA1958Q8N8K9 716 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 OR10G6Q8NH81 332 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 SETD7Q8WTS6 366 aaKnown RBP11.7□□□□□ -0.54
PHF3-205ENST00000494284 SMAD5Q99717 465 aaKnown RBP11.7□□□□□ -0.54
PHF3-205ENST00000494284 GPA33Q99795 319 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 POLR2J3Q9H1A7 115 aaKnown RBP11.7□□□□□ -0.54
PHF3-205ENST00000494284 MRPS30Q9NP92 439 aaKnown RBP11.7□□□□□ -0.54
PHF3-205ENST00000494284 FBXO8Q9NRD0 319 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 APOBEC3BQ9UH17 382 aaKnown RBP11.7□□□□□ -0.54
PHF3-205ENST00000494284 AGAP5A6NIR3 686 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 METTL15A6NJ78 407 aa11.7□□□□□ -0.54
PHF3-205ENST00000494284 A8MV72 311 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms