RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 C9orf40Q8IXQ3 194 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 TMEM156Q8N614 296 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 NATD1Q8N6N6 113 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 OR7A2PQ8NGA2 310 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 CEP70Q8NHQ1 597 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 NUBPLQ8TB37 319 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 KAT2AQ92830 837 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 PNPLA2Q96AD5 504 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 MAELQ96JY0 434 aaKnown RBP11.58□□□□□ -0.56
TRA2A-209ENST00000494255 AMDHD1Q96NU7 426 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 GAL3ST4Q96RP7 486 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 OR10A5Q9H207 317 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 LIN28AQ9H9Z2 209 aaKnown RBP11.58□□□□□ -0.56
TRA2A-209ENST00000494255 MYOTQ9UBF9 498 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 CFL2Q9Y281 166 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 TRAV17A0A0B4J275 112 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 C2orf92A0A1B0GVN3 265 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 WWP2O00308 870 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 ZNF195O14628 629 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 MAN1A2O60476 641 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 PRAMEF2O60811 474 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 ITGA10O75578 1167 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 GPC1P35052 558 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 CD97P48960 835 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 MANFP55145 182 aaKnown RBP11.57□□□□□ -0.56
TRA2A-209ENST00000494255 MRPS35P82673 323 aaKnown RBP11.57□□□□□ -0.56
TRA2A-209ENST00000494255 MGAT2Q10469 447 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 EXOSC7Q15024 291 aaKnown RBP11.57□□□□□ -0.56
TRA2A-209ENST00000494255 RPS6KA2Q15349 733 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 TLR1Q15399 786 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 TRMT12Q53H54 448 aaKnown RBP11.57□□□□□ -0.56
TRA2A-209ENST00000494255 ZNF628Q5EBL2 1059 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 EPGNQ6UW88 154 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 MAVSQ7Z434 540 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 ZNF843Q8N446 348 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 KRTCAP2Q8N6L1 136 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 HORMAD2Q8N7B1 307 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 ASB15Q8WXK1 588 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 CIDECQ96AQ7 238 aaPredicted RBP11.57□□□□□ -0.56
TRA2A-209ENST00000494255 CTHRC1Q96CG8 243 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 WWTR1Q9GZV5 400 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 GLIPR2Q9H4G4 154 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 SLAMF7Q9NQ25 335 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 ACSS1Q9NUB1 689 aaPredicted RBP11.57□□□□□ -0.56
TRA2A-209ENST00000494255 PRODH2Q9UF12 536 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 ZNF639Q9UID6 485 aa11.57□□□□□ -0.56
TRA2A-209ENST00000494255 POLR3GO15318 223 aaPredicted RBP11.56□□□□□ -0.56
TRA2A-209ENST00000494255 PLOD3O60568 738 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 EDF1O60869 148 aaKnown RBP11.56□□□□□ -0.56
TRA2A-209ENST00000494255 OR2J2O76002 312 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 CLPSP04118 112 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 LAMP1P11279 417 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 IDO1P14902 403 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 S1PR1P21453 382 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 CYB561P49447 251 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 CLNS1AP54105 237 aaKnown RBP11.56□□□□□ -0.56
TRA2A-209ENST00000494255 C21orf58P58505 322 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 GUCY1A3Q02108 690 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 C19orf57Q0VDD7 668 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 HSPB3Q12988 150 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 TUBA3CQ13748 450 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 ZNF169Q14929 603 aaPredicted RBP11.56□□□□□ -0.56
TRA2A-209ENST00000494255 EBPQ15125 230 aaKnown RBP11.56□□□□□ -0.56
TRA2A-209ENST00000494255 MPEG1Q2M385 716 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 PGS1Q32NB8 556 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 TUBA3EQ6PEY2 450 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 Q6ZS92 163 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 RIMKLAQ8IXN7 391 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 ZNF615Q8N8J6 731 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 CATSPER1Q8NEC5 780 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 OR52R1Q8NGF1 315 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 SLC22A8Q8TCC7 542 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 TCF7L2Q9NQB0 619 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 AIG1Q9NVV5 245 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 ANKRD10Q9NXR5 420 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 CSAG2Q9Y5P2 127 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 PIEZO2Q9H5I5 2752 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 ATMQ13315 3056 aa11.56□□□□□ -0.56
TRA2A-209ENST00000494255 TMEM200CA6NKL6 621 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 A8MVJ9 347 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 B8ZZF3 427 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 UBDO15205 165 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 COQ9O75208 318 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 C1QL1O75973 258 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 CBX7O95931 251 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 ALDOCP09972 364 aaKnown RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 TRHRP34981 398 aaPredicted RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 CD96P40200 585 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 MC3RP41968 323 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 IDH3AP50213 366 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 ST13P50502 369 aaKnown RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 TNFSF10P50591 281 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 HLCSP50747 726 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 AQP5P55064 265 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 OR1C1Q15619 314 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 GSTA3Q16772 222 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 LSM12Q3MHD2 195 aaKnown RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 PLEKHN1Q494U1 663 aaPredicted RBP11.55□□□□□ -0.56
TRA2A-209ENST00000494255 PIGGQ5H8A4 983 aa11.55□□□□□ -0.56
TRA2A-209ENST00000494255 COLEC12Q5KU26 742 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms