RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 ERVK-6Q9BXR3 956 aa5.19□□□□□ -1.58
SMC2-205ENST00000493955 FARSBQ9NSD9 589 aaKnown RBP5.19□□□□□ -1.58
SMC2-205ENST00000493955 STARD5Q9NSY2 213 aa5.19□□□□□ -1.58
SMC2-205ENST00000493955 FER1L5A0AVI2 2057 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 WDR62O43379 1518 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 AFF2P51816 1311 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 RNF222A6NCQ9 220 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 PRSS44E7EML9 344 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 NEDD8-MDP1E9PL57 170 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 MAPK13O15264 365 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 IGLV1-44P01699 117 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 THRBP10828 461 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 EPB41P11171 864 aaKnown RBP5.18□□□□□ -1.58
SMC2-205ENST00000493955 SGSHP51688 502 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 RPS27AP62979 156 aaKnown RBP5.18□□□□□ -1.58
SMC2-205ENST00000493955 ITPK1Q13572 414 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 ZKSCAN8Q15776 578 aaPredicted RBP5.18□□□□□ -1.58
SMC2-205ENST00000493955 ECSCRQ19T08 205 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 KNOP1Q1ED39 458 aaKnown RBP5.18□□□□□ -1.58
SMC2-205ENST00000493955 ZNF699Q32M78 642 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 TCHHL1Q5QJ38 904 aaPredicted RBP5.18□□□□□ -1.58
SMC2-205ENST00000493955 LRRC8BQ6P9F7 803 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 RANBP3LQ86VV4 465 aaPredicted RBP5.18□□□□□ -1.58
SMC2-205ENST00000493955 KLHDC8BQ8IXV7 354 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 ARFGAP2Q8N6H7 521 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 OR52B6Q8NGF0 335 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 OR10T2Q8NGX3 314 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 C11orf52Q96A22 123 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 LITAFQ99732 161 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 CRACR2AQ9BSW2 395 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 MRPL13Q9BYD1 178 aaKnown RBP5.18□□□□□ -1.58
SMC2-205ENST00000493955 IL1RAPQ9NPH3 570 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 GDAP2Q9NXN4 497 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 CACNG5Q9UF02 275 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 ATP6V1HQ9UI12 483 aa5.18□□□□□ -1.58
SMC2-205ENST00000493955 LOC105371242A0A075B767 164 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 E2F3O00716 465 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 ZFAND5O76080 213 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 CD1DP15813 335 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 ZNF26P17031 533 aaPredicted RBP5.17□□□□□ -1.58
SMC2-205ENST00000493955 TRIM23P36406 574 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 PPIAP62937 165 aaKnown RBP5.17□□□□□ -1.58
SMC2-205ENST00000493955 ENPP2Q13822 863 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 ZFP69Q49AA0 526 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 ARHGAP11AQ6P4F7 1023 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 P4HA3Q7Z4N8 544 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 CUZD1Q86UP6 607 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 STKLD1Q8NE28 680 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 OR1K1Q8NGR3 316 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 FBXO30Q8TB52 745 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 SPPL2AQ8TCT8 520 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 SLC25A36Q96CQ1 311 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 RBM18Q96H35 190 aaKnown RBP5.17□□□□□ -1.58
SMC2-205ENST00000493955 ANKRD27Q96NW4 1050 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 TNFRSF13CQ96RJ3 184 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 ZNF696Q9H7X3 374 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 WDR76Q9H967 626 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 COG4Q9H9E3 785 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 ZNF580Q9UK33 172 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 IKZF3Q9UKT9 509 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 DUSP12Q9UNI6 340 aa5.17□□□□□ -1.58
SMC2-205ENST00000493955 IGHV3-38A0A0C4DH36 116 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 TRIM49BA6NDI0 452 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 MPTX1A8MV57 137 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 FBP2O00757 339 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 TRAFD1O14545 582 aaPredicted RBP5.16□□□□□ -1.58
SMC2-205ENST00000493955 DUSP11O75319 330 aaKnown RBP5.16□□□□□ -1.58
SMC2-205ENST00000493955 OR4F21O95013 312 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 MFN2O95140 757 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 SP1P08047 785 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 AXLP30530 894 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 PTGFRP43088 359 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 RGS19P49795 217 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 NAPAP54920 295 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 KCNMB4Q86W47 210 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 OR4F5Q8NH21 305 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 PCNPQ8WW12 178 aaKnown RBP5.16□□□□□ -1.58
SMC2-205ENST00000493955 ATXN7L3BQ96GX2 97 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 NSMCE3Q96MG7 304 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 VPS35Q96QK1 796 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 TSPAN18Q96SJ8 248 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 ERP44Q9BS26 406 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 RBM24Q9BX46 236 aaKnown RBP5.16□□□□□ -1.58
SMC2-205ENST00000493955 LRRCC1Q9C099 1032 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 WDR41Q9HAD4 459 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 PALMDQ9NP74 551 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 NDE1Q9NXR1 346 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 EIF3KQ9UBQ5 218 aaKnown RBP5.16□□□□□ -1.58
SMC2-205ENST00000493955 FZR1Q9UM11 496 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 FKBP7Q9Y680 259 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 MRC2Q9UBG0 1479 aa5.16□□□□□ -1.58
SMC2-205ENST00000493955 H0YCG3 227 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 H3BTX0 84 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 NR5A2O00482 541 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 ZNF749O43361 778 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 ANXA4P09525 319 aaPredicted RBP5.15□□□□□ -1.58
SMC2-205ENST00000493955 ADORA3P0DMS8 318 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 PRG2P13727 222 aa5.15□□□□□ -1.58
SMC2-205ENST00000493955 HNRNPA2B1P22626 353 aaKnown RBP5.15□□□□□ -1.58
SMC2-205ENST00000493955 SLC1A6P48664 564 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms