RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FASNP49327 2511 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 CACNA1DQ01668 2161 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ZZEF1O43149 2961 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 PCNX3Q9H6A9 2034 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CNTRLQ7Z7A1 2325 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 ARHGAP21Q5T5U3 1957 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 A0A087X0T9 212 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 EDDM13A0A1B0GTR0 161 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 IGLON5A6NGN9 336 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 C10orf142B7Z368 130 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 DFFAO00273 331 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 P4HA2O15460 535 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 TNFSF14O43557 240 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 LRP3O75074 770 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 NADKO95544 446 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 AGR2O95994 175 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 IGLV3-19P01714 112 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 PCCBP05166 539 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 ALPIP09923 528 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 PIRTP0C851 137 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 FAM228BP0C875 321 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 THEGLP0DJG4 465 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 ANXA7P20073 488 aaKnown RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 OR1E1P30953 314 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CCR1P32246 355 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CHRNA3P32297 505 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 RDXP35241 583 aaKnown RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 ACADVLP49748 655 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 SERPINH1P50454 418 aaKnown RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 PDX1P52945 283 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 ST8SIA6P61647 398 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CDR2Q01850 454 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 MYL5Q02045 173 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 GNA12Q03113 381 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CCDC173Q0VFZ6 552 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 RALGDSQ12967 914 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 PTPRCAPQ14761 206 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CYTH1Q15438 398 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 TGIF1Q15583 401 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CDKN3Q16667 212 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 GTDC1Q4AE62 458 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CDONQ4KMG0 1287 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 ZNF805Q5CZA5 627 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CCDC183Q5T5S1 534 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 NDUFAF5Q5TEU4 345 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 HES3Q5TGS1 186 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 NSUN5P2Q63ZY6 315 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 DNAJC24Q6P3W2 148 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 GUSBP11Q6P575 273 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 DOK6Q6PKX4 331 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 BNIPLQ7Z465 357 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 TRMT11Q7Z4G4 463 aaKnown RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 VASH2Q86V25 355 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 NLRP14Q86W24 1093 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 ARHGAP12Q8IWW6 846 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 SCML4Q8N228 414 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 ARHGAP18Q8N392 663 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 AMER3Q8N944 861 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 MLKLQ8NB16 471 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 NEK11Q8NG66 645 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 HM13Q8TCT9 377 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 UCMAQ8WVF2 138 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 SNRNP27Q8WVK2 155 aaKnown RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 ARHGEF2Q92974 986 aaKnown RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 HAUS1Q96CS2 278 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CNDP2Q96KP4 475 aaKnown RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 BTN2A3PQ96KV6 586 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 BMFQ96LC9 184 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 HSFY1Q96LI6 401 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 AGAP3Q96P47 875 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 KLF6Q99612 283 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 AGPAT1Q99943 283 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 LRRC61Q9BV99 259 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 TRIM4Q9C037 500 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 XPO4Q9C0E2 1151 aaKnown RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 SLC39A8Q9C0K1 460 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 HAUS4Q9H6D7 363 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 PDFQ9HBH1 243 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 ZNF71Q9NQZ8 489 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 ADAM22Q9P0K1 906 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 IFNKQ9P0W0 207 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 COPG2Q9UBF2 871 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 LIMA1Q9UHB6 759 aaKnown RBP2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CAMK2AQ9UQM7 478 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 OR1A2Q9Y585 309 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 KIAA1549Q9HCM3 1950 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 CACNA1CQ13936 2221 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 SEC16AO15027 2179 aa2.76□□□□□ -1.97
PTCD3-218ENST00000493430 NBASA2RRP1 2371 aa2.75□□□□□ -1.97
PTCD3-218ENST00000493430 GTF3C1Q12789 2109 aa2.75□□□□□ -1.97
PTCD3-218ENST00000493430 DMXL2Q8TDJ6 3036 aa2.75□□□□□ -1.97
PTCD3-218ENST00000493430 PIEZO2Q9H5I5 2752 aa2.75□□□□□ -1.97
PTCD3-218ENST00000493430 HEATR5AQ86XA9 2040 aa2.75□□□□□ -1.97
PTCD3-218ENST00000493430 DIDO1Q9BTC0 2240 aaKnown RBP2.75□□□□□ -1.97
PTCD3-218ENST00000493430 IGLV3-10A0A075B6K4 115 aa2.75□□□□□ -1.97
PTCD3-218ENST00000493430 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.75□□□□□ -1.97
PTCD3-218ENST00000493430 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-218ENST00000493430 A0A1B0GTQ1 180 aa2.75□□□□□ -1.97
PTCD3-218ENST00000493430 GTPBP10A4D1E9 387 aaKnown RBP2.75□□□□□ -1.97
PTCD3-218ENST00000493430 TRABD2BA6NFA1 517 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms