RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 ADIPOR1Q96A54 375 aa12.49□□□□□ -0.41
SAMM50-204ENST00000493161 TUBA1CQ9BQE3 449 aa12.49□□□□□ -0.41
SAMM50-204ENST00000493161 CALHM2Q9HA72 323 aa12.49□□□□□ -0.41
SAMM50-204ENST00000493161 CXorf21Q9HAI6 301 aa12.49□□□□□ -0.41
SAMM50-204ENST00000493161 DTX4Q9Y2E6 619 aa12.49□□□□□ -0.41
SAMM50-204ENST00000493161 MED12Q93074 2177 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 A0A0A6YYD5 115 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 SH3D21A4FU49 640 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 CES2O00748 559 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 AIFM1O95831 613 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 IL18BPO95998 194 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 FAM58BPP0C7Q3 252 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 SLC35E2BP0CK96 405 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 SLC35E2P0CK97 266 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 STMN1P16949 149 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 BUD31P41223 144 aaPredicted RBP12.48□□□□□ -0.41
SAMM50-204ENST00000493161 PCDH1Q08174 1060 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 ZKSCAN8Q15776 578 aaPredicted RBP12.48□□□□□ -0.41
SAMM50-204ENST00000493161 ISCA2Q86U28 154 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 MYLK4Q86YV6 388 aaPredicted RBP12.48□□□□□ -0.41
SAMM50-204ENST00000493161 ZNF615Q8N8J6 731 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 NUDT8Q8WV74 236 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 TP53INP1Q96A56 240 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 INTS12Q96CB8 462 aaKnown RBP12.48□□□□□ -0.41
SAMM50-204ENST00000493161 TSPAN17Q96FV3 270 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 DOCK7Q96N67 2140 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 DACH2Q96NX9 599 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 ATOH8Q96SQ7 321 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 GPR22Q99680 433 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 RBBP8Q99708 897 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 PELOQ9BRX2 385 aaKnown RBP12.48□□□□□ -0.41
SAMM50-204ENST00000493161 SNX15Q9NRS6 342 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 NSMCE4AQ9NXX6 385 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 OPTCQ9UBM4 332 aa12.48□□□□□ -0.41
SAMM50-204ENST00000493161 LRRC14BA6NHZ5 514 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 SUPT3HB4E1H0 165 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 H7C1Q1 480 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 K7EPI3 171 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 SIAH2O43255 324 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 ERN1O75460 977 aaKnown RBP12.47□□□□□ -0.41
SAMM50-204ENST00000493161 SUPT3HO75486 399 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 ABCB1P08183 1280 aaPredicted RBP12.47□□□□□ -0.41
SAMM50-204ENST00000493161 NR2F6P10588 404 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 ABCD3P28288 659 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 PCSK6P29122 969 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 SERPINB1P30740 379 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 PIK3CBP42338 1070 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 NEK2P51955 445 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 MRPS25P82663 173 aaKnown RBP12.47□□□□□ -0.41
SAMM50-204ENST00000493161 SRYQ05066 204 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 FUT7Q11130 342 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 SF3B4Q15427 424 aaKnown RBP eCLIP12.47□□□□□ -0.41
SAMM50-204ENST00000493161 NNATQ16517 81 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 Q5PR19 223 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 SHEQ5VZ18 495 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 TIGD3Q6B0B8 471 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 ANGPTL8Q6UXH0 198 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 CMC1Q7Z7K0 106 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 GCNT2Q8N0V5 402 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 TEX9Q8N6V9 391 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 ZPLD1Q8TCW7 415 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 UBTD2Q8WUN7 234 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 TMEM41AQ96HV5 264 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 COX4I2Q96KJ9 171 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 SECISBP2Q96T21 854 aaKnown RBP12.47□□□□□ -0.41
SAMM50-204ENST00000493161 G6PC3Q9BUM1 346 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 OR10A5Q9H207 317 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 DDX31Q9H8H2 851 aaKnown RBP12.47□□□□□ -0.41
SAMM50-204ENST00000493161 GALNT9Q9HCQ5 603 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 NUDT4Q9NZJ9 180 aa12.47□□□□□ -0.41
SAMM50-204ENST00000493161 C6orf203Q9P0P8 240 aaPredicted RBP12.47□□□□□ -0.41
SAMM50-204ENST00000493161 CAPN14A8MX76 684 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 SMAD7O15105 426 aaKnown RBP12.46□□□□□ -0.41
SAMM50-204ENST00000493161 GOSR1O95249 250 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 CYP4B1P13584 511 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 MTHFD2P13995 350 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 EPB42P16452 691 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 S1PR1P21453 382 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 GPX3P22352 226 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 GALNSP34059 522 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 PTGDSP41222 190 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 STARP49675 285 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 RAB10P61026 200 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 RCAN2Q14206 197 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 SETDB1Q15047 1291 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 HLA-DQA1Q5Y7H0 255 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 ADGRE4PQ86SQ3 457 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 GALNT12Q8IXK2 581 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 SIMC1Q8NDZ2 872 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 OR1J4Q8NGS1 313 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 STAG3L4Q8TBR4 150 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 RDH11Q8TC12 318 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 ZNF592Q92610 1267 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 HGDQ93099 445 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 ISL2Q96A47 359 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 Q96MF0 132 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 NODALQ96S42 347 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 CPNE1Q99829 537 aa12.46□□□□□ -0.41
SAMM50-204ENST00000493161 NXF5Q9H1B4 397 aaKnown RBP12.46□□□□□ -0.41
SAMM50-204ENST00000493161 SERHLQ9NQF3 203 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms