RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 RIPK3Q9Y572 518 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NAV1Q8NEY1 1877 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 LOC102723971A0A1B0GUV8 181 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM213A2RRL7 107 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM89A2RUT3 159 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 MANSC4A6NHS7 340 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 DUXAA6NLW8 204 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 EFCAB7A8K855 629 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 M0QXV9 152 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 M0QYT0 321 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SDHDO14521 159 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SIVA1O15304 175 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CFLARO15519 480 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 RS1O15537 224 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 RGS10O43665 173 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 OR10H3O60404 316 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 FCGR3BO75015 233 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ZMPSTE24O75844 475 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SCELO95171 688 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ACTL6AO96019 429 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 IGHV2-70P01814 119 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 FGGP02679 453 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CEACAM5P06731 702 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CD3EP07766 207 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 F7P08709 466 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 FBP1P09467 338 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 HOXC6P09630 235 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 RRASP10301 218 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 LYL1P12980 280 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ETS2P15036 469 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NCK1P16333 377 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF12P17014 697 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 GOT1P17174 413 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ZP3P21754 424 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 AMPD1P23109 780 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CXCR2P25025 360 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NDUFS1P28331 727 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SDHAP31040 664 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 HIBADHP31937 336 aaKnown RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CFHR2P36980 270 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PBX1P40424 430 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PTGFRP43088 359 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 MAP2K3P46734 347 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 RGRP47804 291 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 RGS6P49758 472 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 RPL14P50914 215 aaKnown RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 MAPK12P53778 367 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CABP4P57796 275 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ERVK-25P63136 954 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 MRPS22P82650 360 aaKnown RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 DHODHQ02127 395 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 GAGE1Q13065 139 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TNK1Q13470 666 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 GPNMBQ14956 572 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 EFNB3Q15768 340 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 MICBQ29980 383 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SOWAHAQ2M3V2 549 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 BSXQ3C1V8 233 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ACCSLQ4AC99 568 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 AASDHQ4L235 1098 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PAN3Q58A45 887 aaKnown RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PIGGQ5H8A4 983 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PPM1JQ5JR12 505 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PHF19Q5T6S3 580 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SLC22A10Q63ZE4 541 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TXNDC8Q6A555 127 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ELP2Q6IA86 826 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 C3P1Q6ZMU1 363 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 Q6ZVL8 140 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 LYG2Q86SG7 212 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 TSPAN33Q86UF1 283 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 KLHDC8AQ8IYD2 350 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ZDHHC23Q8IYP9 409 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF683Q8IZ20 524 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PUSL1Q8N0Z8 303 aaKnown RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ARHGAP24Q8N264 748 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PARP8Q8N3A8 854 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CPXM2Q8N436 756 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 LRRC18Q8N456 261 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 HORMAD2Q8N7B1 307 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 Q8NA96 180 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NECAP1Q8NC96 275 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CCDC54Q8NEL0 328 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 NLGN2Q8NFZ4 835 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 OR5T2Q8NGG2 359 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 DYNC2LI1Q8TCX1 351 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 WIPF2Q8TF74 440 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SNX33Q8WV41 574 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PIGCQ92535 297 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 P2RX5Q93086 422 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 LHX4Q969G2 390 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 PIGTQ969N2 578 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 MCHR2Q969V1 340 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ERGIC1Q969X5 290 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 ARRDC3Q96B67 414 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SCARF2Q96GP6 870 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CDKN2AIPNLQ96HQ2 116 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CHAMP1Q96JM3 812 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 SLC30A3Q99726 388 aa3.97□□□□□ -1.77
BRCA1-220ENST00000492859 CMKLR1Q99788 373 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms