RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 GPR78Q96P69 363 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 GAL3ST4Q96RP7 486 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 CLEC4MQ9H2X3 399 aaPredicted RBP18.27■□□□□ 0.52
NELFE-212ENST00000492539 KIAA1549Q9HCM3 1950 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 ANKRD33BA6NCL7 494 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 OR6C76A6NM76 312 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 SUPT3HB4E1H0 165 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 TRIM3O75382 744 aaPredicted RBP18.26■□□□□ 0.51
NELFE-212ENST00000492539 SUPT3HO75486 399 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 GPR75O95800 540 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 COL6A2P12110 1019 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 MTHFD2P13995 350 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 EPB42P16452 691 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 TLX1P31314 330 aaPredicted RBP18.26■□□□□ 0.51
NELFE-212ENST00000492539 CEACAM8P31997 349 aaPredicted RBP18.26■□□□□ 0.51
NELFE-212ENST00000492539 GALNSP34059 522 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 DDX39BQ13838 428 aaKnown RBP18.26■□□□□ 0.51
NELFE-212ENST00000492539 ZNF267Q14586 743 aaPredicted RBP18.26■□□□□ 0.51
NELFE-212ENST00000492539 RASA2Q15283 850 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 FBXL19-AS1Q494R0 122 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 TBCELQ5QJ74 424 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 POMZP3Q6PJE2 187 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 LIX1Q8N485 282 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 ZNF441Q8N8Z8 693 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 CENPKQ9BS16 269 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 DOHHQ9BU89 302 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 ASB4Q9Y574 426 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 MPDZO75970 2070 aa18.26■□□□□ 0.51
NELFE-212ENST00000492539 A0A0A6YYD5 115 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 SYCE1LA8MT33 242 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 AHRRA9YTQ3 701 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 DVL2O14641 736 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 TMPRSS11DO60235 418 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 LRATO95237 230 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 EPPINO95925 133 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 TRPC1P48995 793 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 ASCL1P50553 236 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 RPS13P62277 151 aaKnown RBP18.25■□□□□ 0.51
NELFE-212ENST00000492539 CRYZQ08257 329 aaKnown RBP18.25■□□□□ 0.51
NELFE-212ENST00000492539 DUSP8Q13202 625 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 TSNAXIP1Q2TAA8 658 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 ACSF3Q4G176 576 aaPredicted RBP18.25■□□□□ 0.51
NELFE-212ENST00000492539 FLYWCH1Q4VC44 716 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 LIPJQ5W064 366 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 PLD6Q8N2A8 252 aaKnown RBP18.25■□□□□ 0.51
NELFE-212ENST00000492539 TNIP2Q8NFZ5 429 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 MZB1Q8WU39 189 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 RIT1Q92963 219 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 RMND5BQ96G75 393 aaPredicted RBP18.25■□□□□ 0.51
NELFE-212ENST00000492539 ZNF597Q96LX8 424 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 JSRP1Q96MG2 331 aaPredicted RBP18.25■□□□□ 0.51
NELFE-212ENST00000492539 MTERF1Q99551 399 aaKnown RBP18.25■□□□□ 0.51
NELFE-212ENST00000492539 LYARQ9NX58 379 aaKnown RBP18.25■□□□□ 0.51
NELFE-212ENST00000492539 TBK1Q9UHD2 729 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 NAV3Q8IVL0 2385 aa18.25■□□□□ 0.51
NELFE-212ENST00000492539 A6NNC1 897 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 WASHC1A8K0Z3 465 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 KDM4EB2RXH2 506 aaPredicted RBP18.24■□□□□ 0.51
NELFE-212ENST00000492539 H0YIV9 168 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 OR10H2O60403 315 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 EEDO75530 441 aaKnown RBP18.24■□□□□ 0.51
NELFE-212ENST00000492539 KLK2P20151 261 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 BMP5P22003 454 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 GDF1P27539 372 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 UQCRC1P31930 480 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 BSGP35613 385 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 TIMP3P35625 211 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 SLCO1A2P46721 670 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 TAGAPQ8N103 731 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 TEX9Q8N6V9 391 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 EPS8L3Q8TE67 593 aaKnown RBP18.24■□□□□ 0.51
NELFE-212ENST00000492539 RNASE6Q93091 150 aaKnown RBP18.24■□□□□ 0.51
NELFE-212ENST00000492539 DOCK7Q96N67 2140 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 PRDM14Q9GZV8 571 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 UBQLN3Q9H347 655 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 DDX31Q9H8H2 851 aaKnown RBP18.24■□□□□ 0.51
NELFE-212ENST00000492539 RRAGDQ9NQL2 400 aaPredicted RBP18.24■□□□□ 0.51
NELFE-212ENST00000492539 PCDHGA11Q9Y5H2 935 aa18.24■□□□□ 0.51
NELFE-212ENST00000492539 C15orf38-AP3S2A0A0A6YYH1 394 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 A0A1W2PR48 441 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 CDH16O75309 829 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 HPNP05981 417 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 SLC35E2P0CK97 266 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 NR2F6P10588 404 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 PTX3P26022 381 aaPredicted RBP18.23■□□□□ 0.51
NELFE-212ENST00000492539 CUL3Q13618 768 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 SETDB1Q15047 1291 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 RPS6KA2Q15349 733 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 CEBPEQ15744 281 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 TECRLQ5HYJ1 363 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 TMEM198Q66K66 360 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 LCA5Q86VQ0 697 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 CDC20BQ86Y33 519 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 LACC1Q8IV20 430 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 ACMSDQ8TDX5 336 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 FAM222BQ8WU58 562 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 DIO2Q92813 273 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 TP53INP1Q96A56 240 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 LRRC46Q96FV0 321 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 TIMP4Q99727 224 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms