RNA–Protein interactions for RNA: ENST00000491827.1

U2SURP-213, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 3

Gene U2SURP, Length 824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-213ENST00000491827 NDST2P52849 883 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 SRP54P61011 504 aaKnown RBP3.22□□□□□ -1.89
U2SURP-213ENST00000491827 CDKL1Q00532 357 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 GAMTQ14353 236 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 FASTKD3Q14CZ7 662 aaKnown RBP3.22□□□□□ -1.89
U2SURP-213ENST00000491827 LPAL2Q16609 132 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 HERC4Q5GLZ8 1057 aaPredicted RBP3.22□□□□□ -1.89
U2SURP-213ENST00000491827 TOR1AIP1Q5JTV8 583 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 PRAMEF7Q5VXH5 474 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 HIST2H2AA3Q6FI13 130 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 FAAP20Q6NZ36 180 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 LRRTM1Q86UE6 522 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 ZFAND4Q86XD8 727 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 OR4N5Q8IXE1 308 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 METTL4Q8N3J2 472 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 HDDC3Q8N4P3 179 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 MRPL43Q8N983 215 aaKnown RBP3.22□□□□□ -1.89
U2SURP-213ENST00000491827 LEMD2Q8NC56 503 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 TMEM185AQ8NFB2 350 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 OR6F1Q8NGZ6 308 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 OR4L1Q8NH43 312 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 ATP8B4Q8TF62 1192 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 TCP11Q8WWU5 503 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 RPGRIP1Q96KN7 1286 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 AGAP4Q96P64 663 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 ABCG4Q9H172 646 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 DPEP3Q9H4B8 488 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 KCNK13Q9HB14 408 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 NMUR1Q9HB89 426 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 VPS54Q9P1Q0 977 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 BAIAP2L1Q9UHR4 511 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 MRTO4Q9UKD2 239 aaKnown RBP3.22□□□□□ -1.89
U2SURP-213ENST00000491827 DNPEPQ9ULA0 475 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 TMCC3Q9ULS5 477 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 RNF215Q9Y6U7 377 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 MEGF6O75095 1541 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 ANKRD11Q6UB99 2663 aaPredicted RBP3.22□□□□□ -1.89
U2SURP-213ENST00000491827 USP32Q8NFA0 1604 aa3.22□□□□□ -1.89
U2SURP-213ENST00000491827 FLNBO75369 2602 aaKnown RBP3.22□□□□□ -1.89
U2SURP-213ENST00000491827 VCANP13611 3396 aa3.21□□□□□ -1.89
U2SURP-213ENST00000491827 KIF1BO60333 1816 aa3.21□□□□□ -1.89
U2SURP-213ENST00000491827 LAMA2P24043 3122 aaKnown RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 RGPD3A6NKT7 1758 aaPredicted RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 RGPD4Q7Z3J3 1758 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 IGHV3-20A0A0C4DH32 117 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 SHISA7A6NL88 538 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 YJEFN3A6XGL0 299 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 A8MU76 341 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 G3V2L1 256 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 DUS4LO95620 317 aaKnown RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 SLC4A1P02730 911 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 PTMAP06454 111 aaKnown RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 PGK2P07205 417 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 APRTP07741 180 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 UGT1A4P22310 534 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 ACP1P24666 158 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 TNFRSF4P43489 277 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 GEMP55040 296 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 HERV-K104P63124 156 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 RBBP4Q09028 425 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 RIGQ13278 110 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 KIAA0141Q14154 515 aaPredicted RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 PDK1Q15118 436 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 NECTIN1Q15223 517 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 TRADDQ15628 312 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 CCDC40Q4G0X9 1142 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 FASTKD1Q53R41 847 aaKnown RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 DDI2Q5TDH0 399 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 NKAIN2Q5VXU1 208 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 CDHR3Q6ZTQ4 885 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 TAF8Q7Z7C8 310 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 ADAMTSL2Q86TH1 951 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 GVQW1Q8N7I0 195 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 OR52E1Q8NGJ3 308 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 SPPL2AQ8TCT8 520 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 U2AF1L4Q8WU68 220 aaKnown RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 LIPHQ8WWY8 451 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 GTF3AQ92664 365 aaKnown RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 RAB39BQ96DA2 213 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 ATXN7L3BQ96GX2 97 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 PCED1BQ96HM7 432 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 POM121L2Q96KW2 1035 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 CXorf58Q96LI9 332 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 LINC00479Q96M42 142 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 ALKBH3Q96Q83 286 aaPredicted RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 RAB40CQ96S21 281 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 TSPAN18Q96SJ8 248 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 MYCBPQ99417 103 aaPredicted RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 LGMNQ99538 433 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 MCRIP2Q9BUT9 160 aaKnown RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 FUNDC2Q9BWH2 189 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 WWP1Q9H0M0 922 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 UPF3AQ9H1J1 476 aaKnown RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 C1orf21Q9H246 121 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 SLC26A1Q9H2B4 701 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 HOMER3Q9NSC5 361 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 TECRQ9NZ01 308 aaKnown RBP3.21□□□□□ -1.9
U2SURP-213ENST00000491827 THEGQ9P2T0 379 aa3.21□□□□□ -1.9
U2SURP-213ENST00000491827 FAM153AQ9UHL3 310 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms