RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 DESI1Q6ICB0 168 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 ADNP2Q6IQ32 1131 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 PAQR3Q6TCH7 311 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 TMIGD1Q6UXZ0 262 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 STAC2Q6ZMT1 411 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 ZNF793Q6ZN11 406 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 VN1R5Q7Z5H4 357 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 LUZP1Q86V48 1076 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 LINGO1Q96FE5 620 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 RBM18Q96H35 190 aaKnown RBP12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 NDNQ99608 321 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 TRAF4Q9BUZ4 470 aaPredicted RBP12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 METTL7AQ9H8H3 244 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 GALNT9Q9HCQ5 603 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 LYRM4Q9HD34 91 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 PROCRQ9UNN8 238 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 MAD1L1Q9Y6D9 718 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 C2orf92A0A1B0GVN3 265 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 ELOA3DA6NLF2 546 aaPredicted RBP12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 PTNP21246 168 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 TCEA1P23193 301 aaKnown RBP12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 AP1S2P56377 157 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 PLIN5Q00G26 463 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 SLBPQ14493 270 aaKnown RBP eCLIP12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 ELOA3BQ3SY89 546 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 HIST2H2BDQ6DRA6 164 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 FAM166AQ6J272 317 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 CASC4Q6P4E1 433 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 CLEC2AQ6UVW9 174 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 CHMP1BQ7LBR1 199 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 RFLNBQ8N5W9 214 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 ELOA3Q8NG57 546 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 C11orf24Q96F05 449 aaPredicted RBP12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 F2RL3Q96RI0 385 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 ACTR8Q9H981 624 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 EML4Q9HC35 981 aaKnown RBP12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 TAS2R10Q9NYW0 307 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 COMMD10Q9Y6G5 202 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 CADP27708 2225 aa12.3□□□□□ -0.44
EXOSC3-207ENST00000490516 PABPN1LA6NDY0 278 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 LIASO43766 372 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 KIAA0513O60268 411 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 ABCB7O75027 752 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 ICOSLGO75144 302 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 CLEC3AO75596 197 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 CBR3O75828 277 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 FTCDO95954 541 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 HNF1AP20823 631 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 CPN2P22792 545 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 PTGDSP41222 190 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 TMED10P49755 219 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 RPP38P78345 283 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 THOC5Q13769 683 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 ZNF672Q499Z4 452 aaPredicted RBP12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 AAGABQ6PD74 315 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 UBE3DQ7Z6J8 389 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 UBQLNLQ8IYU4 475 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 C3orf56Q8N813 242 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 WDSUB1Q8N9V3 476 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 BBOF1Q8ND07 529 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 KBTBD8Q8NFY9 601 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 TTLQ8NG68 377 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 HTRA1Q92743 480 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 SFXN2Q96NB2 322 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 ACTR6Q9GZN1 396 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 ALG2Q9H553 416 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 SNX15Q9NRS6 342 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 RYDENQ9NUL5 291 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 PAK5Q9P286 719 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 PTBP2Q9UKA9 531 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 EXO1Q9UQ84 846 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 B3GALT5Q9Y2C3 310 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 KCNE2Q9Y6J6 123 aa12.29□□□□□ -0.44
EXOSC3-207ENST00000490516 LOC100289279A0A1B0GTE1 492 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 ANKDD1BA6NHY2 528 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 OR6C76A6NM76 312 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 RTCAO00442 366 aaKnown RBP12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 MFAP3LO75121 409 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 H2AFYO75367 372 aaKnown RBP12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 CD3EP07766 207 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 ABCB1P08183 1280 aaPredicted RBP12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 C1GALT1C1LP0DN25 315 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 ALOX15P16050 662 aaPredicted RBP12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 SLC25A16P16260 332 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 SSTR4P31391 388 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 PGGT1BP53609 377 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 BASP1P80723 227 aaKnown RBP12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 ZNF844Q08AG5 666 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 SNX1Q13596 522 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 DHX34Q14147 1143 aaKnown RBP12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 NRF1Q16656 503 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 KCTD19Q17RG1 926 aaPredicted RBP12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 NCMAPQ5T1S8 102 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 SLCO4C1Q6ZQN7 724 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 ATG4DQ86TL0 474 aaPredicted RBP12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 ZNF525Q8N782 197 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 CCDC89Q8N998 374 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 ACOT4Q8N9L9 421 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 TP53INP1Q96A56 240 aa12.28□□□□□ -0.44
EXOSC3-207ENST00000490516 RHBDF1Q96CC6 855 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms