RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.3■□□□□ 0.22e-6■■□□□ 12.5
YIPF3-208ENST00000490447 ZNF469Q96JG9 3925 aaPredicted RBP16.29■□□□□ 0.2
YIPF3-208ENST00000490447 ITPR3Q14573 2671 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 LRRC14BA6NHZ5 514 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 SEMA3DO95025 777 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 KLHL2O95198 593 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 CLDN9O95484 217 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 CLPSP04118 112 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 TIMP3P35625 211 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 NEK2P51955 445 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 BICRALQ6AI39 1079 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 TTC19Q6DKK2 380 aaPredicted RBP16.29■□□□□ 0.2
YIPF3-208ENST00000490447 METTL2BQ6P1Q9 378 aaKnown RBP16.29■□□□□ 0.2
YIPF3-208ENST00000490447 ZNF441Q8N8Z8 693 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 L3MBTL4Q8NA19 623 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 NAXEQ8NCW5 288 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 OR4K14Q8NGD5 310 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 SPPL2AQ8TCT8 520 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 FAM222BQ8WU58 562 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 SH3GL2Q99962 352 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 TMUB1Q9BVT8 246 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 PRDM14Q9GZV8 571 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 OR10A5Q9H207 317 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 TEX10Q9NXF1 929 aaPredicted RBP16.29■□□□□ 0.2
YIPF3-208ENST00000490447 C15orf41Q9Y2V0 281 aa16.29■□□□□ 0.2
YIPF3-208ENST00000490447 A0A096LPK6 155 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 A6NNC1 897 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 PGRMC2O15173 223 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 ACSL3O95573 720 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 HPNP05981 417 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 NT5EP21589 574 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 TYK2P29597 1187 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 SERPINB8P50452 374 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 CDK9P50750 372 aaKnown RBP16.28■□□□□ 0.2
YIPF3-208ENST00000490447 CCNG1P51959 295 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 WNT3P56703 355 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 PAGE2Q7Z2X7 111 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 TGIF2LYQ8IUE0 185 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 GNRHR2Q96P88 292 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 CDK15Q96Q40 435 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 TRIB1Q96RU8 372 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 ANGPTL4Q9BY76 406 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 LIME1Q9H400 295 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 NOL11Q9H8H0 719 aaKnown RBP16.28■□□□□ 0.2
YIPF3-208ENST00000490447 AHSPQ9NZD4 102 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 SLC6A5Q9Y345 797 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 IKBKGQ9Y6K9 419 aa16.28■□□□□ 0.2
YIPF3-208ENST00000490447 ANKHD1Q8IWZ3 2542 aaKnown RBP16.27■□□□□ 0.2
YIPF3-208ENST00000490447 CDH16O75309 829 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 SIX3O95343 332 aaPredicted RBP16.27■□□□□ 0.2
YIPF3-208ENST00000490447 CT62P0C5K7 136 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 TACR1P25103 407 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 CEACAM8P31997 349 aaPredicted RBP16.27■□□□□ 0.2
YIPF3-208ENST00000490447 GCKP35557 465 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 XKP51811 444 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 DGKQP52824 942 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 FUT7Q11130 342 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 KRTAP21-3Q3LHN1 58 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 NSUN5P2Q63ZY6 315 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 CDC20BQ86Y33 519 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 PRR22Q8IZ63 422 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 C17orf47Q8NEP4 570 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 OR7G1Q8NGA0 311 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 UCN3Q969E3 161 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 VPS11Q9H270 941 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 UBQLN3Q9H347 655 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 METTL7AQ9H8H3 244 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 CFL2Q9Y281 166 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 PLEKHA6Q9Y2H5 1048 aa16.27■□□□□ 0.2
YIPF3-208ENST00000490447 MAP1AP78559 2803 aaPredicted RBP16.26■□□□□ 0.19
YIPF3-208ENST00000490447 VPS13CQ709C8 3753 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 A0A1W2PS29 197 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 TUBAL3A6NHL2 446 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 GOLGA6L10A6NI86 522 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 EEF1E1-BLOC1S5C9J1V9 151 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 GNB5O14775 395 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 EEF1E1O43324 174 aaKnown RBP16.26■□□□□ 0.19
YIPF3-208ENST00000490447 KLK1P06870 262 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 KLK2P20151 261 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 ABCD3P28288 659 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 PHBP35232 272 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 CASP3P42574 277 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 ZNF136P52737 540 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 IFT88Q13099 833 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 RCAN2Q14206 197 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 FBXL19-AS1Q494R0 122 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 CCNYL2Q5T2Q4 361 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 C10orf62Q5T681 223 aaPredicted RBP16.26■□□□□ 0.19
YIPF3-208ENST00000490447 FRG2Q64ET8 278 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 VASNQ6EMK4 673 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 ZDHHC24Q6UX98 284 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 KIF18BQ86Y91 864 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 ZNF615Q8N8J6 731 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 PTGR2Q8N8N7 351 aaPredicted RBP16.26■□□□□ 0.19
YIPF3-208ENST00000490447 OR1J4Q8NGS1 313 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 ABTB1Q969K4 478 aaPredicted RBP16.26■□□□□ 0.19
YIPF3-208ENST00000490447 PHF21BQ96EK2 531 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 TMEM41AQ96HV5 264 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 ALPK1Q96QP1 1244 aa16.26■□□□□ 0.19
YIPF3-208ENST00000490447 FRG2BQ96QU4 278 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms