RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PROX1Q92786 737 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 DIO2Q92813 273 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 KAT2AQ92830 837 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 GCDHQ92947 438 aaPredicted RBP6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 PEX13Q92968 403 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 LRRC45Q96CN5 670 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 FAM118BQ9BPY3 351 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 HEMGNQ9BXL5 484 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 WWOXQ9NZC7 414 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 INTUQ9ULD6 942 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 DLGAP4Q9Y2H0 992 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 MED16Q9Y2X0 877 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 EPN1Q9Y6I3 576 aaPredicted RBP6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 ARFGEF3Q5TH69 2177 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 SYNDIG1LA6NDD5 238 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 VWC2LB2RUY7 222 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 CLOCKO15516 846 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 PSTPIP1O43586 416 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 DLX3O60479 287 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 CTNSO60931 367 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 NDUFS3O75489 264 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 STK10O94804 968 aaKnown RBP6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 SNX4O95219 450 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 ESR1P03372 595 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 ZNF708P17019 499 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 SERPINB3P29508 390 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 FMO4P31512 558 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 RBMXP38159 391 aaKnown RBP6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 GRIA1P42261 906 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 STARP49675 285 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 MYL5Q02045 173 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 CDH17Q12864 832 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 TOMM20Q15388 145 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 PARP6Q2NL67 630 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 AWAT1Q58HT5 328 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 NCMAPQ5T1S8 102 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 OR2A2Q6IF42 318 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 AGTRAPQ6RW13 159 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 ENPP6Q6UWR7 440 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 SEZ6L2Q6UXD5 910 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 TMEM64Q6YI46 380 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 GPSM1Q86YR5 675 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 KATNAL2Q8IYT4 538 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 PRELID2Q8N945 189 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 KBTBD8Q8NFY9 601 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 SPPL2AQ8TCT8 520 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 FAM216AQ8WUB2 273 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 PYCR2Q96C36 320 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 SENP5Q96HI0 755 aaPredicted RBP6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 TMEM41AQ96HV5 264 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 ZNF845Q96IR2 970 aaPredicted RBP6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 RUNDC3BQ96NL0 473 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 OR4K3Q96R72 315 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 KRT12Q99456 494 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 NTMT1Q9BV86 223 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 ZNF747Q9BV97 191 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 NPLQ9BXD5 320 aaPredicted RBP6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 ALOXE3Q9BYJ1 711 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 TRIM2Q9C040 744 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 OR2B2Q9GZK3 357 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 TEX10Q9NXF1 929 aaPredicted RBP6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 COPS7AQ9UBW8 275 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 ANAPC5Q9UJX4 755 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 TCAF1Q9Y4C2 921 aa6.37□□□□□ -1.39
PDLIM1-203ENST00000490391 DNAH1Q9P2D7 4330 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 A0A0G2JN53 185 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 H3BMM5 538 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 ZBTB14O43829 449 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 SERPINA6P08185 405 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 TMEM253P0C7T8 217 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 MPC1LP0DKB6 136 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 COMTP21964 271 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 ADRA1DP25100 572 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 ARNTP27540 789 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 CASP3P42574 277 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 SLC1A1P43005 524 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 MASP1P48740 699 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 CLDN15P56746 228 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 FBXW4P57775 412 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 EIF3EP60228 445 aaKnown RBP6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 BTN3A2P78410 334 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 REEP5Q00765 189 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 NAE1Q13564 534 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 CUL1Q13616 776 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 CYP1B1Q16678 543 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 C11orf71Q6IPW1 123 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 CDPF1Q6NVV7 123 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 DGAT2L6Q6ZPD8 337 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 TREML1Q86YW5 311 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 BANPQ8N9N5 519 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 FBLIM1Q8WUP2 373 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 FIG4Q92562 907 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 HTRA1Q92743 480 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 SOX7Q9BT81 388 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 TMPRSS13Q9BYE2 586 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 WWTR1Q9GZV5 400 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 RNF122Q9H9V4 155 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 TREX1Q9NSU2 369 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 WHRNQ9P202 907 aa6.36□□□□□ -1.39
PDLIM1-203ENST00000490391 PTBP2Q9UKA9 531 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms